Q10CQ1 · MAD14_ORYSJ
- ProteinMADS-box transcription factor 14
- GeneMADS14
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids246 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
Probable transcription factor. May be involved in the control of flowering time.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | |
Molecular Function | protein dimerization activity | |
Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | |
Biological Process | cell differentiation | |
Biological Process | flower development | |
Biological Process | positive regulation of transcription by RNA polymerase II | |
Biological Process | regulation of transcription by RNA polymerase II |
Keywords
- Molecular function
- Biological process
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameMADS-box transcription factor 14
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa
Accessions
- Primary accessionQ10CQ1
- Secondary accessions
Proteomes
Genome annotation databases
Subcellular Location
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Chain | PRO_0000229899 | 1-246 | MADS-box transcription factor 14 | ||
Proteomic databases
Expression
Tissue specificity
Highly expressed in sterile lemmas, at intermediate levels in stamens, and weakly in lemmas, paleas and carpels.
Developmental stage
Expressed at early stage of flower development in the spikelet (rice flower) apical meristem and later in developing stamens, pistil primordia and differentiated anthers.
Gene expression databases
Interaction
Subunit
May interact with the K-box of MADS1 and MADS6.
Binary interactions
Type | Entry 1 | Entry 2 | Number of experiments | IntAct | |
---|---|---|---|---|---|
BINARY | Q10CQ1 | MADS1 Q10PZ9 | 4 | EBI-627890, EBI-627957 | |
BINARY | Q10CQ1 | MADS6 Q6EU39 | 5 | EBI-627890, EBI-627980 | |
BINARY | Q10CQ1 | MADS7 Q0J466 | 4 | EBI-627890, EBI-627872 |
Protein-protein interaction databases
Structure
Sequence & Isoform
- Sequence statusComplete
This entry describes 2 isoforms produced by Alternative splicing.
Q10CQ1-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name1
- Length246
- Mass (Da)28,423
- Last updated2007-07-24 v2
- Checksum80CF6A3CAFB4084C
Q10CQ1-2
- Name2
- Differences from canonical
- 171-171: E → ENPCSFLQ
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A0P0W361 | A0A0P0W361_ORYSJ | Os03g0752800 | 149 |
Features
Showing features for sequence conflict, alternative sequence.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Sequence conflict | 27 | in Ref. 1; AAF19047 | |||
Alternative sequence | VSP_017783 | 171 | in isoform 2 | ||
Sequence conflict | 183 | in Ref. 2; BAA94342 | |||
Sequence conflict | 193 | in Ref. 2; BAA94342 | |||
Sequence conflict | 225 | in Ref. 2; BAA94342 | |||
Sequence conflict | 232 | in Ref. 1; AAF19047 | |||
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AF058697 EMBL· GenBank· DDBJ | AAF19047.1 EMBL· GenBank· DDBJ | mRNA | ||
AB041020 EMBL· GenBank· DDBJ | BAA94342.1 EMBL· GenBank· DDBJ | mRNA | ||
AY332478 EMBL· GenBank· DDBJ | AAQ01164.1 EMBL· GenBank· DDBJ | mRNA | ||
AY551916 EMBL· GenBank· DDBJ | AAS59822.1 EMBL· GenBank· DDBJ | mRNA | ||
AC092556 EMBL· GenBank· DDBJ | AAR87240.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AC135225 EMBL· GenBank· DDBJ | AAP68361.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AF377947 EMBL· GenBank· DDBJ | AAM34398.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
DP000009 EMBL· GenBank· DDBJ | ABF98924.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
DP000009 EMBL· GenBank· DDBJ | ABF98925.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AP008209 EMBL· GenBank· DDBJ | BAF13214.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AP014959 EMBL· GenBank· DDBJ | BAS86428.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CM000140 EMBL· GenBank· DDBJ | EEE59943.1 EMBL· GenBank· DDBJ | Genomic DNA |