Q10CQ1 · MAD14_ORYSJ

Function

function

Probable transcription factor. May be involved in the control of flowering time.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular Functionprotein dimerization activity
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Biological Processcell differentiation
Biological Processflower development
Biological Processpositive regulation of transcription by RNA polymerase II
Biological Processregulation of transcription by RNA polymerase II

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    MADS-box transcription factor 14
  • Alternative names
    • FDRMADS6
    • OsMADS14
    • Protein AGAMOUS-like 10
    • Protein APETALA1-like B
    • RMADS211

Gene names

    • Name
      MADS14
    • Synonyms
      AGL10, RAP1B
    • ORF names
      OJ1112_G08.13, OsJ_12598
      , OSJNBa0032E21.04, OSJNBa0047E24.2
    • Ordered locus names
      Os03g0752800, LOC_Os03g54160

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q10CQ1
  • Secondary accessions
    • B9FBV1
    • Q10CQ2
    • Q7Y023
    • Q8LLN3
    • Q9M7C6

Proteomes

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00002298991-246MADS-box transcription factor 14

Proteomic databases

Expression

Tissue specificity

Highly expressed in sterile lemmas, at intermediate levels in stamens, and weakly in lemmas, paleas and carpels.

Developmental stage

Expressed at early stage of flower development in the spikelet (rice flower) apical meristem and later in developing stamens, pistil primordia and differentiated anthers.

Gene expression databases

Interaction

Subunit

May interact with the K-box of MADS1 and MADS6.

Binary interactions

TypeEntry 1Entry 2Number of experimentsIntAct
BINARY Q10CQ1MADS1 Q10PZ94EBI-627890, EBI-627957
BINARY Q10CQ1MADS6 Q6EU395EBI-627890, EBI-627980
BINARY Q10CQ1MADS7 Q0J4664EBI-627890, EBI-627872

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for domain, region.

Type
IDPosition(s)Description
Domain1-61MADS-box
Domain88-178K-box
Region180-199Disordered

Phylogenomic databases

Family and domain databases

Sequence & Isoform

Align isoforms (2)
  • Sequence status
    Complete

This entry describes 2 isoforms produced by Alternative splicing.

Q10CQ1-1

This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

  • Length
    246
  • Mass (Da)
    28,423
  • Last updated
    2007-07-24 v2
  • Checksum
    80CF6A3CAFB4084C
MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWCHEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLEQQLENSLKHIRSRKSQLMLESINELQRKEKSLQEENKVLQKELVEKQKVQKQQVQWDQTQPQTSSSSSSFMMREALPTTNISNYPAAAGERIEDVAAGQPQHVRIGLPPWMLSHING

Q10CQ1-2

  • Name
    2
  • See also
    sequence in UniParc or sequence clusters in UniRef
  • Differences from canonical

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
A0A0P0W361A0A0P0W361_ORYSJOs03g0752800149

Features

Showing features for sequence conflict, alternative sequence.

Type
IDPosition(s)Description
Sequence conflict27in Ref. 1; AAF19047
Alternative sequenceVSP_017783171in isoform 2
Sequence conflict183in Ref. 2; BAA94342
Sequence conflict193in Ref. 2; BAA94342
Sequence conflict225in Ref. 2; BAA94342
Sequence conflict232in Ref. 1; AAF19047

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AF058697
EMBL· GenBank· DDBJ
AAF19047.1
EMBL· GenBank· DDBJ
mRNA
AB041020
EMBL· GenBank· DDBJ
BAA94342.1
EMBL· GenBank· DDBJ
mRNA
AY332478
EMBL· GenBank· DDBJ
AAQ01164.1
EMBL· GenBank· DDBJ
mRNA
AY551916
EMBL· GenBank· DDBJ
AAS59822.1
EMBL· GenBank· DDBJ
mRNA
AC092556
EMBL· GenBank· DDBJ
AAR87240.1
EMBL· GenBank· DDBJ
Genomic DNA
AC135225
EMBL· GenBank· DDBJ
AAP68361.1
EMBL· GenBank· DDBJ
Genomic DNA
AF377947
EMBL· GenBank· DDBJ
AAM34398.1
EMBL· GenBank· DDBJ
Genomic DNA
DP000009
EMBL· GenBank· DDBJ
ABF98924.1
EMBL· GenBank· DDBJ
Genomic DNA
DP000009
EMBL· GenBank· DDBJ
ABF98925.1
EMBL· GenBank· DDBJ
Genomic DNA
AP008209
EMBL· GenBank· DDBJ
BAF13214.1
EMBL· GenBank· DDBJ
Genomic DNA
AP014959
EMBL· GenBank· DDBJ
BAS86428.1
EMBL· GenBank· DDBJ
Genomic DNA
CM000140
EMBL· GenBank· DDBJ
EEE59943.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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