Q0JDA2 · SDH5_ORYSJ

Function

Pathway

Carbohydrate metabolism; tricarboxylic acid cycle.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentmitochondrial inner membrane
Cellular Componentrespiratory chain complex II
Biological Processtricarboxylic acid cycle

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Succinate dehydrogenase subunit 5, mitochondrial

Gene names

    • Name
      SDH5
    • ORF names
      OsJ_14772
      , OSJNBa0033G16.15
      , OSJNBb0108J11.2
    • Ordered locus names
      Os04g0418000
      , LOC_Os04g34100

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Nipponbare
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Oryzoideae > Oryzeae > Oryzinae > Oryza > Oryza sativa

Accessions

  • Primary accession
    Q0JDA2
  • Secondary accessions
    • A0A0P0W9Z6
    • Q7X6C3

Proteomes

Genome annotation databases

Subcellular Location

PTM/Processing

Features

Showing features for transit peptide, chain.

TypeIDPosition(s)Description
Transit peptide1-63Mitochondrion
ChainPRO_000043175164-231Succinate dehydrogenase subunit 5, mitochondrial

Proteomic databases

Interaction

Subunit

Component of complex II composed of eight subunits in plants: four classical SDH subunits SDH1, SDH2, SDH3 and SDH4 (a flavoprotein (FP), an iron-sulfur protein (IP), and a cytochrome b composed of a large and a small subunit.), as well as four subunits unknown in mitochondria from bacteria and heterotrophic eukaryotes.

Protein-protein interaction databases

Family & Domains

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.
  • Length
    231
  • Mass (Da)
    24,583
  • Last updated
    2006-10-03 v1
  • Checksum
    F44F13170BADFF53
MAAALRSSCAAARRLLRISPAALSTLTAASSRPAAVAPLARPIAAAAVSGGNNAFSWNLRRLFSSNEKHLPAISDPEVESAFKDLMAASWTGLPDSLVIEAKKAASKATDDKAGKEALLNVFRAAEACEEFGGVLVTLRMALDDLCGITGENVGPLPGYIEDAVKSAYKRYMKYLESFGPEENYLRKKVENELGTKMIHLKMRCSGVGSEWGKITLIGTSGISGSYVELRA

Sequence caution

The sequence CAE02910.3 differs from that shown. Reason: Erroneous gene model prediction
The sequence CAE03169.1 differs from that shown. Reason: Erroneous gene model prediction
The sequence EAZ30714.1 differs from that shown. Reason: Erroneous gene model prediction

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AL606598
EMBL· GenBank· DDBJ
CAE03169.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
AL606618
EMBL· GenBank· DDBJ
CAE02910.3
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
AP008210
EMBL· GenBank· DDBJ
BAF14685.1
EMBL· GenBank· DDBJ
Genomic DNA
AP014960
EMBL· GenBank· DDBJ
BAS89168.1
EMBL· GenBank· DDBJ
Genomic DNA
CM000141
EMBL· GenBank· DDBJ
EAZ30714.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
AK099124
EMBL· GenBank· DDBJ
BAG93939.1
EMBL· GenBank· DDBJ
mRNA
AK106155
EMBL· GenBank· DDBJ
BAG97606.1
EMBL· GenBank· DDBJ
mRNA
AK119714
EMBL· GenBank· DDBJ
BAG99762.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

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