Q09477 · DPFF1_CAEEL
- ProteinZinc finger protein dpff-1
- Genedpff-1
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids372 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score5/5
Function
function
Probable transcription factor, involved in meiosis and stress protection.
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | nBAF complex | |
Cellular Component | nucleus | |
Molecular Function | metal ion binding | |
Biological Process | apoptotic process | |
Biological Process | chromatin remodeling | |
Biological Process | meiotic cell cycle | |
Biological Process | nervous system development | |
Biological Process | positive regulation of double-strand break repair | |
Biological Process | regulation of G1/S transition of mitotic cell cycle | |
Biological Process | regulation of mitotic metaphase/anaphase transition | |
Biological Process | regulation of nucleotide-excision repair | |
Biological Process | response to heat |
Keywords
- Biological process
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameZinc finger protein dpff-1
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Metazoa > Ecdysozoa > Nematoda > Chromadorea > Rhabditida > Rhabditina > Rhabditomorpha > Rhabditoidea > Rhabditidae > Peloderinae > Caenorhabditis
Accessions
- Primary accessionQ09477
- Secondary accessions
Proteomes
Organism-specific databases
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Chain | PRO_0000168157 | 1-372 | Zinc finger protein dpff-1 | ||
Proteomic databases
Expression
Developmental stage
Expressed throughout all embryonic and post-embryonic stages.
Gene expression databases
Interaction
Complex viewer
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for compositional bias, region, zinc finger.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 108-130 | Polar residues | |||
Region | 108-204 | Disordered | |||
Compositional bias | 171-197 | Polar residues | |||
Zinc finger | 212-235 | C2H2-type | |||
Zinc finger | 256-314 | PHD-type 1 | |||
Zinc finger | 316-361 | PHD-type 2 | |||
Sequence similarities
Belongs to the requiem/DPF family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence & Isoforms
- Sequence statusComplete
This entry describes 3 isoforms produced by Alternative splicing.
Q09477-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Namea
- Length372
- Mass (Da)42,418
- Last updated2002-08-02 v2
- Checksum2A6DA04EDDC619B2
Q09477-2
- Nameb
Q09477-3
- Namec
Features
Showing features for compositional bias, alternative sequence.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Compositional bias | 108-130 | Polar residues | |||
Alternative sequence | VSP_057651 | 112 | in isoform c | ||
Compositional bias | 171-197 | Polar residues | |||
Alternative sequence | VSP_057652 | 182-192 | in isoform b and isoform c | ||
Alternative sequence | VSP_057653 | 193-372 | in isoform b and isoform c | ||
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
FO080703 EMBL· GenBank· DDBJ | CCD65970.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
FO080703 EMBL· GenBank· DDBJ | CCD65971.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
FO080703 EMBL· GenBank· DDBJ | CCD65978.1 EMBL· GenBank· DDBJ | Genomic DNA |