P92527 · CCMC_ARATH
- ProteinPutative cytochrome c biosynthesis ccmC-like mitochondrial protein
- GeneCCMC
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids256 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score4/5
Function
function
May be involved in the export of heme to the mitochondrion for the biogenesis of c-type cytochromes.
Miscellaneous
A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of the duplicated genes (At2g07681 and At2g07771) is demonstrated.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | mitochondrial membrane | |
Molecular Function | heme binding | |
Molecular Function | heme transmembrane transporter activity | |
Biological Process | cytochrome complex assembly |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Recommended namePutative cytochrome c biosynthesis ccmC-like mitochondrial protein
- Alternative names
Gene names
Encoded on
- Mitochondrion
Organism names
- Strains
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionP92527
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Mitochondrion membrane ; Multi-pass membrane protein
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transmembrane | 21-41 | Helical | ||||
Sequence: ILIGSWLFLTAMAIYLSLGVA | ||||||
Transmembrane | 60-80 | Helical | ||||
Sequence: VAWMSIIVYIATAINTFLFLL | ||||||
Transmembrane | 91-111 | Helical | ||||
Sequence: GTGIEMGAFFTLFTLVTGGFW | ||||||
Transmembrane | 129-149 | Helical | ||||
Sequence: VFILFFIYLGALCFQKLSVEL | ||||||
Transmembrane | 151-171 | Helical | ||||
Sequence: SILICVGLIDIPIIKFSVNWW | ||||||
Transmembrane | 192-212 | Helical | ||||
Sequence: LIPILSNFANFLFLTCILFVL |
Keywords
- Cellular component
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000201561 | 1-256 | Putative cytochrome c biosynthesis ccmC-like mitochondrial protein | |||
Sequence: MSVSLLQPSFLMSKTRSYAQILIGSWLFLTAMAIYLSLGVAPLDFQQGGNSRILYVHVPVAWMSIIVYIATAINTFLFLLTKHPLYLRSSGTGIEMGAFFTLFTLVTGGFWGRPMWGTFWVWDARLTSVFILFFIYLGALCFQKLSVELASILICVGLIDIPIIKFSVNWWNTLHQPGSISRFGTSIHVSMLIPILSNFANFLFLTCILFVLETRLLILSFLESSITEEIEAREGIPKPSSLALFASMAEWLKRPT |
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Sequence similarities
Belongs to the CcmC/CycZ/HelC family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length256
- Mass (Da)28,798
- Last updated2023-09-13 v5
- Checksum3340020E493C9613
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
F4IL76 | F4IL76_ARATH | ABCI5 | 256 |
Features
Showing features for sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Sequence conflict | 146 | in Ref. 1; CAA69832, 3; AAM15415/AAM15509, 4; AAT41735/AAT70446 and 5; ABS50608/ABS50609 | ||||
Sequence: S → P | ||||||
Sequence conflict | 184 | in Ref. 3; AAM15415 | ||||
Sequence: G → S |
RNA Editing
Edited at positions 35 45 60 62 88 111 132 134 141 149 153 155 156 158 166 174 183 190 192 203 205 207 217 219 225
The stop codon at position 257 is created by RNA editing
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
Y08501 EMBL· GenBank· DDBJ | CAA69832.3 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
BK010421 EMBL· GenBank· DDBJ | DAB41520.2 EMBL· GenBank· DDBJ | Genomic DNA | ||
AC007143 EMBL· GenBank· DDBJ | AAM15415.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
AC007730 EMBL· GenBank· DDBJ | AAM15509.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
BT014752 EMBL· GenBank· DDBJ | AAT41735.1 EMBL· GenBank· DDBJ | mRNA | Sequence problems. | |
BT014995 EMBL· GenBank· DDBJ | AAT70446.1 EMBL· GenBank· DDBJ | mRNA | Sequence problems. | |
EF488896 EMBL· GenBank· DDBJ | ABS50608.1 EMBL· GenBank· DDBJ | mRNA | Sequence problems. | |
EF488897 EMBL· GenBank· DDBJ | ABS50609.1 EMBL· GenBank· DDBJ | mRNA | Sequence problems. |