Cloning of the RNA polymerase alpha subunit gene from Thermus thermophilus HB8 and characterization of the protein.Wada T., Yamazaki T., Kuramitsu S., Kyogoku Y.View abstractCited forNUCLEOTIDE SEQUENCE [GENOMIC DNA]CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Biochem. 125:143-150 (1999)Cited in6
Complete genome sequence of Thermus thermophilus HB8.Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.Cited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainATCC 27634 / DSM 579 / HB8CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)Submission Submitted to EMBL/GenBank/DDBJ databases (NOV-2004)Cited in99+99+
Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus.Tsiboli P., Herfurth E., Choli T.View abstractCited forPROTEIN SEQUENCE OF 2-27CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCEur. J. Biochem. 226:169-177 (1994)Cited in21
Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry.Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.View abstractCited forMASS SPECTROMETRYStrainATCC 27634 / DSM 579 / HB8CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCProteomics 5:4818-4831 (2005)Cited in53
Structure of a bacterial 30S ribosomal subunit at 5.5 A resolution.Clemons W.M. Jr., May J.L.C., Wimberly B.T., McCutcheon J.P., Capel M.S., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE 30S SUBUNIT, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNature 400:833-840 (1999)Cited in8Mapped to1
Structure of the 30S ribosomal subunit.Wimberly B.T., Brodersen D.E., Clemons W.M. Jr., Morgan-Warren R.J., Carter A.P., Vonrhein C., Hartsch T., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNature 407:327-339 (2000)Cited in20Mapped to2
Structure of functionally activated small ribosomal subunit at 3.3 A resolution.Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I.[...], Yonath A.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCCell 102:615-623 (2000)Cited in19
The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit.Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCCell 103:1143-1154 (2000)Cited in20
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics.Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNature 407:340-348 (2000)Cited in20
The path of messenger RNA through the ribosome.Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.View abstractCited forX-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCCell 106:233-241 (2001)Cited in41
Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3.Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T.[...], Franceschi F.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCEMBO J. 20:1829-1839 (2001)Cited in25
Crystal structure of an initiation factor bound to the 30S ribosomal subunit.Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 291:498-501 (2001)Cited in21
Crystal structure of the ribosome at 5.5 A resolution.Yusupov M.M., Yusupova G.Z., Baucom A., Lieberman K., Earnest T.N., Cate J.H.D., Noller H.F.View abstractCited forX-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 292:883-896 (2001)Cited in471Mapped to17
Recognition of cognate transfer RNA by the 30S ribosomal subunit.Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 292:897-902 (2001)Cited in20
Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA.Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT, FUNCTION, COFACTOR, SUBUNITCategoriesFunction, Interaction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Mol. Biol. 316:725-768 (2002)Cited in201
Crystal structures of the ribosome in complex with release factors RF1 and RF2 bound to a cognate stop codon.Petry S., Brodersen D.E., Murphy F.V., Dunham C.M., Selmer M., Tarry M.J., Kelley A.C., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (5.90 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH RF1 OR RF2, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCCell 123:1255-1266 (2005)Cited in27Mapped to28
Insights into translational termination from the structure of RF2 bound to the ribosome.Weixlbaumer A., Jin H., Neubauer C., Voorhees R.M., Petry S., Kelley A.C., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.45 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH RF2, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 322:953-956 (2008)Cited in51Mapped to1
Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release.Jin H., Kelley A.C., Loakes D., Ramakrishnan V.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.10 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH RF2, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCProc. Natl. Acad. Sci. U.S.A. 107:8593-8598 (2010)Cited in52
Structural insights into the role of rRNA modifications in protein synthesis and ribosome assembly.Polikanov Y.S., Melnikov S.V., Soll D., Steitz T.A.View abstractCited forX-RAY CRYSTALLOGRAPHY (2.30 ANGSTROMS) OF THE 70S RIBOSOME, COFACTOR, SUBUNITCategoriesFunction, Interaction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNat. Struct. Mol. Biol. 22:342-344 (2015)Cited in3Mapped to47
Structure of the mammalian antimicrobial peptide Bac7(1-16) bound within the exit tunnel of a bacterial ribosome.Seefeldt A.C., Graf M., Perebaskine N., Nguyen F., Arenz S., Mardirossian M., Scocchi M., Wilson D.N., Innis C.A.View abstractCited forX-RAY CRYSTALLOGRAPHY (2.80 ANGSTROMS) OF 2-209 OF THE 70S RIBOSOME, COFACTOR, SUBUNITCategoriesFunction, Interaction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNucleic Acids Res. 44:2429-2438 (2016)Cited in3Mapped to49
Macrolones target bacterial ribosomes and DNA gyrase and can evade resistance mechanisms.Aleksandrova E.V., Ma C.X., Klepacki D., Alizadeh F., Vazquez-Laslop N., Liang J.H., Polikanov Y.S., Mankin A.S.View abstractCategoryStructureSourcePDB: 8VTU, PDB: 8VTV, PDB: 8VTW, PDB: 8VTX, PDB: 8VTYPubMedEurope PMCNat Chem Biol 0:0-0 (2024)Mapped to50
Berberine analog of chloramphenicol exhibits a distinct mode of action and unveils ribosome plasticity.Batool Z., Pavlova J.A., Paranjpe M.N., Tereshchenkov A.G., Lukianov D.A., Osterman I.A., Bogdanov A.A., Sumbatyan N.V., Polikanov Y.S.View abstractCategoryStructureSourcePDB: 9B00PubMedEurope PMCStructure 32:1429-1442.e6 (2024)Mapped to49
An antibiotic preorganized for ribosomal binding overcomes antimicrobial resistance.Wu K.J.Y., Tresco B.I.C., Ramkissoon A., Aleksandrova E.V., Syroegin E.A., See D.N.Y., Liow P., Dittemore G.A., Yu M.[...], Myers A.G.View abstractCategoryStructureSourcePDB: 8UD6, PDB: 8UD7, PDB: 8UD8PubMedEurope PMCScience 383:721-726 (2024)Mapped to49
Structural basis of Cfr-mediated antimicrobial resistance and mechanisms to evade it.Aleksandrova E.V., Wu K.J.Y., Tresco B.I.C., Syroegin E.A., Killeavy E.E., Balasanyants S.M., Svetlov M.S., Gregory S.T., Atkinson G.C.[...], Polikanov Y.S.View abstractCategoryStructureSourcePDB: 8G29, PDB: 8G2A, PDB: 8G2B, PDB: 8G2C, PDB: 8G2DPubMedEurope PMCNat Chem Biol 20:867-876 (2024)Mapped to49
Development of 2nd generation aminomethyl spectinomycins that overcome native efflux in <i>Mycobacterium</i> abscessus.Phelps G.A., Cheramie M.N., Fernando D.M., Selchow P., Meyer C.J., Waidyarachchi S.L., Dharuman S., Liu J., Meuli M.[...], Lee R.E.View abstractCategoryStructureSourcePDB: 8UVR, PDB: 8UVSPubMedEurope PMCProc Natl Acad Sci U S A 121:e2314101120-e2314101120 (2024)Mapped to49