P68350 · DOF15_ARATH

Function

function

Transcription factor that binds specifically to a 5'-AA[AG]G-3' consensus core sequence. Acts as a negative regulator in the phytochrome-mediated light responses. Controls phyB-mediated end-of-day response and the phyA-mediated anthocyanin accumulation. Not involved in direct flowering time regulation.

Features

Showing features for binding site.

117520406080100120140160
TypeIDPosition(s)Description
Binding site64Zn2+ (UniProtKB | ChEBI)
Binding site67Zn2+ (UniProtKB | ChEBI)
Binding site89Zn2+ (UniProtKB | ChEBI)
Binding site92Zn2+ (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity
Molecular Functionmetal ion binding
Molecular Functiontranscription cis-regulatory region binding
Biological Processregulation of DNA-templated transcription
Biological Processseed coat development

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Dof zinc finger protein DOF1.5
  • Short names
    AtDOF1.5

Gene names

    • Name
      DOF1.5
    • Synonyms
      COG1
    • ORF names
      F28N24.35
    • Ordered locus names
      At1g29160

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    P68350
  • Secondary accessions
    • A2RVJ9

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00000742671-175Dof zinc finger protein DOF1.5

Proteomic databases

Expression

Induction

By red or far-red light. Circadian-regulation. The transcript level rises progressively from dawn and decreases during the night.

Gene expression databases

Interaction

Binary interactions

TypeEntry 1Entry 2Number of experimentsIntact
BINARY P68350ENAP1 Q8VZI93EBI-15205840, EBI-1998580

Protein-protein interaction databases

Family & Domains

Features

Showing features for compositional bias, region, zinc finger, motif.

TypeIDPosition(s)Description
Compositional bias29-50Polar residues
Region29-57Disordered
Zinc finger62-116Dof-type
Motif162-168Nuclear localization signal

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    175
  • Mass (Da)
    19,423
  • Last updated
    2004-11-09 v1
  • Checksum
    BFF644D70332137E
MATQDSQGIKLFGKTITFNANITQTIKKEEQQQQQQPELQATTAVRSPSSDLTAEKRPDKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPVGAGRRKSKPPGRVGGFAELLGAATGAVDQVELDALLVEEWRAATASHGGFRHDFPVKRLRCYTDGQSC

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias29-50Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AC021043
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
CP002684
EMBL· GenBank· DDBJ
AEE31051.1
EMBL· GenBank· DDBJ
Genomic DNA
BT029990
EMBL· GenBank· DDBJ
ABN04728.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

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