P51430 · RS62_ARATH

Function

function

Component of the 40S small ribosomal subunit (By similarity).
Plays an important role in controlling cell growth and proliferation through the selective translation of particular classes of mRNA (By similarity).

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytosolic ribosome
Cellular Componentcytosolic small ribosomal subunit
Cellular Componentplasma membrane
Cellular Componentplasmodesma
Molecular FunctionmRNA binding
Molecular Functionstructural constituent of ribosome
Biological Processtranslation

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Small ribosomal subunit protein eS6y
  • Alternative names
    • 40S ribosomal protein S6-2
    • Protein EMBRYO DEFECTIVE 3010

Gene names

    • Name
      RPS6B
    • Synonyms
      EMB3010, RPS6
    • ORF names
      F12B17_290
    • Ordered locus names
      At5g10360

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    P51430
  • Secondary accessions
    • O04670
    • Q9LX91

Proteomes

Organism-specific databases

Genome annotation databases

PTM/Processing

Features

Showing features for chain, modified residue.

TypeIDPosition(s)Description
ChainPRO_00001373301-249Small ribosomal subunit protein eS6y
Modified residue237Phosphoserine

Post-translational modification

Ribosomal protein S6 is the major substrate of protein kinases in eukaryote ribosomes.

Keywords

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for compositional bias, region.

TypeIDPosition(s)Description
Compositional bias219-235Basic and acidic residues
Region219-249Disordered

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete

This entry describes 1 isoforms produced by Alternative splicing. A number of isoforms are produced. According to EST sequences.

P51430-1

This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

  • Length
    249
  • Mass (Da)
    28,162
  • Last updated
    2002-06-20 v3
  • Checksum
    910A2F0EBBF32D2C
MKFNVANPTTGCQKKLEIDDDQKLRAFFDKRLSQEVSGDALGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRRTFTNKKGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSAPAKPVAA

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
F4KGU2F4KGU2_ARATHEMB3010197

Features

Showing features for sequence conflict, compositional bias.

TypeIDPosition(s)Description
Sequence conflict209in Ref. 1; CAA74381
Compositional bias219-235Basic and acidic residues
Sequence conflict243in Ref. 5; CAA81278
Sequence conflict246in Ref. 5
Sequence conflict248in Ref. 5

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
Y14052
EMBL· GenBank· DDBJ
CAA74381.1
EMBL· GenBank· DDBJ
mRNA
AL353995
EMBL· GenBank· DDBJ
CAB89407.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002688
EMBL· GenBank· DDBJ
AED91531.1
EMBL· GenBank· DDBJ
Genomic DNA
AY045594
EMBL· GenBank· DDBJ
AAK73952.1
EMBL· GenBank· DDBJ
mRNA
AY057634
EMBL· GenBank· DDBJ
AAL15265.1
EMBL· GenBank· DDBJ
mRNA
AY093783
EMBL· GenBank· DDBJ
AAM10399.1
EMBL· GenBank· DDBJ
mRNA
Z26511
EMBL· GenBank· DDBJ
CAA81278.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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