P49063 · PGLR2_ARATH

Function

function

May function in depolymerizing pectin during pollen development, germination, and tube growth. Acts as an exo-polygalacturonase.

Catalytic activity

Features

Showing features for active site.

144450100150200250300350400
TypeIDPosition(s)Description
Active site261Proton donor
Active site284

GO annotations

AspectTerm
Cellular Componentextracellular region
Molecular Functiongalacturan 1,4-alpha-galacturonidase activity
Molecular Functionpolygalacturonase activity
Biological Processcarbohydrate metabolic process
Biological Processcell wall organization

Keywords

Enzyme and pathway databases

Protein family/group databases

Names & Taxonomy

Protein names

  • Recommended name
    Exopolygalacturonase clone GBGA483
  • EC number
  • Short names
    ExoPG
  • Alternative names
    • Galacturan 1,4-alpha-galacturonidase
    • Pectinase

Gene names

    • ORF names
      F17A17.19
    • Ordered locus names
      At3g07850

Organism names

  • Taxonomic identifier
  • Strains
    • cv. C24
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    P49063
  • Secondary accessions
    • Q9SFC9

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

PTM/Processing

Features

Showing features for signal, chain, glycosylation, disulfide bond.

TypeIDPosition(s)Description
Signal1-23
ChainPRO_000002480024-444Exopolygalacturonase clone GBGA483
Glycosylation222N-linked (GlcNAc...) asparagine
Disulfide bond263↔280
Glycosylation342N-linked (GlcNAc...) asparagine
Disulfide bond391↔397
Disulfide bond420↔436

Keywords

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for repeat.

TypeIDPosition(s)Description
Repeat220-246PbH1 1
Repeat247-268PbH1 2
Repeat270-290PbH1 3
Repeat300-321PbH1 4
Repeat330-351PbH1 5

Sequence similarities

Belongs to the glycosyl hydrolase 28 family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.
  • Length
    444
  • Mass (Da)
    45,600
  • Last updated
    2003-01-10 v2
  • Checksum
    DF1D4C30FB1C3F11
MVGSHKASGVLLVLLVVMATTIANGTPVVDKAKNAATAVEDTAKNAATAVGGAAASVGAKVSGAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITVPKGEYMVESLEFKGPCKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCAKTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTDGIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPVKGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCKAGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSACSNIKPILSGKLVPAACTEVAKPGP

Features

Showing features for sequence conflict.

TypeIDPosition(s)Description
Sequence conflict81in Ref. 1; CAA51033

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
X72292
EMBL· GenBank· DDBJ
CAA51033.1
EMBL· GenBank· DDBJ
mRNA
AC013483
EMBL· GenBank· DDBJ
AAF21195.1
EMBL· GenBank· DDBJ
Genomic DNA
CP002686
EMBL· GenBank· DDBJ
AEE74611.1
EMBL· GenBank· DDBJ
Genomic DNA
AY056173
EMBL· GenBank· DDBJ
AAL07022.1
EMBL· GenBank· DDBJ
mRNA
AY091200
EMBL· GenBank· DDBJ
AAM14139.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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