P46526 · CS66_WHEAT
- ProteinCold shock protein CS66
- GeneCS66
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids469 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score3/5
Function
function
May reduce intracellular freezing damage during winter by hydrogen-bonding to the lattice of the nascent ice crystals, thus modifying the structure and/or propagation of ice crystals.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Biological Process | cold acclimation | |
Biological Process | response to abscisic acid | |
Biological Process | response to water deprivation |
Names & Taxonomy
Protein names
- Recommended nameCold shock protein CS66
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Pooideae > Triticodae > Triticeae > Triticinae > Triticum
Accessions
- Primary accessionP46526
Proteomes
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000100064 | 1-469 | Cold shock protein CS66 | |||
Sequence: MDHQAHGAGEKKGIMEKIKEKLPGGHGDHKETAGAHGHAGTVTHGAPATGGAYGQEGHTGTTGTGLHGAHAGEKKGVMENIKDKLPGGHADHQQTGGTYGQQGHTGTATHGTLATGGTYGQQGHTGTAMHGTPATNGTYGEHGHTGTATGGSYGEQRHTGVTGTGTHDIGEKKSLMENIKEKLPGGHGDNQQTAGTYGQQGHFATGTHGTPATGGTYGEQGHAGVTGTGTHGTGEKKGLMENIKDKLPGGHGDHQQTGGTYGQQGHTGAATHGTPAGGGTYEQHGHTGMTGTGTHGTGGKKGVMENIKDKLPGGHSDNQQTGGAYEQQGHTGAATHGTPASGGTYEQHGHTGMTGTGTHGTGEKKAVMENIKDKLPGGHGDHQQTGGAYGQQGHTGTATHGTPAGGGTYEQHGNTGMTGTETHGTTATGGTHGQHGHTGTTGTGTHGTDGVGEKKSLMDKIKDKLPGQH |
Expression
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for repeat, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Repeat | 9-31 | 1-1 | ||||
Sequence: GEKKGIMEKIKEKLPGGHGDHKE | ||||||
Region | 9-390 | 7 X 23 AA approximate repeats | ||||
Sequence: GEKKGIMEKIKEKLPGGHGDHKETAGAHGHAGTVTHGAPATGGAYGQEGHTGTTGTGLHGAHAGEKKGVMENIKDKLPGGHADHQQTGGTYGQQGHTGTATHGTLATGGTYGQQGHTGTAMHGTPATNGTYGEHGHTGTATGGSYGEQRHTGVTGTGTHDIGEKKSLMENIKEKLPGGHGDNQQTAGTYGQQGHFATGTHGTPATGGTYGEQGHAGVTGTGTHGTGEKKGLMENIKDKLPGGHGDHQQTGGTYGQQGHTGAATHGTPAGGGTYEQHGHTGMTGTGTHGTGGKKGVMENIKDKLPGGHSDNQQTGGAYEQQGHTGAATHGTPASGGTYEQHGHTGMTGTGTHGTGEKKAVMENIKDKLPGGHGDHQQTGGAYG | ||||||
Repeat | 49-62 | 2-1 | ||||
Sequence: TGGAYGQEGHTGTT | ||||||
Region | 49-441 | 14 X 14 AA approximate repeats | ||||
Sequence: TGGAYGQEGHTGTTGTGLHGAHAGEKKGVMENIKDKLPGGHADHQQTGGTYGQQGHTGTATHGTLATGGTYGQQGHTGTAMHGTPATNGTYGEHGHTGTATGGSYGEQRHTGVTGTGTHDIGEKKSLMENIKEKLPGGHGDNQQTAGTYGQQGHFATGTHGTPATGGTYGEQGHAGVTGTGTHGTGEKKGLMENIKDKLPGGHGDHQQTGGTYGQQGHTGAATHGTPAGGGTYEQHGHTGMTGTGTHGTGGKKGVMENIKDKLPGGHSDNQQTGGAYEQQGHTGAATHGTPASGGTYEQHGHTGMTGTGTHGTGEKKAVMENIKDKLPGGHGDHQQTGGAYGQQGHTGTATHGTPAGGGTYEQHGNTGMTGTETHGTTATGGTHGQHGHTGTT | ||||||
Repeat | 72-94 | 1-2 | ||||
Sequence: GEKKGVMENIKDKLPGGHADHQQ | ||||||
Region | 87-112 | Disordered | ||||
Sequence: GGHADHQQTGGTYGQQGHTGTATHGT | ||||||
Compositional bias | 94-112 | Polar residues | ||||
Sequence: QTGGTYGQQGHTGTATHGT | ||||||
Repeat | 95-108 | 2-2 | ||||
Sequence: TGGTYGQQGHTGTA | ||||||
Repeat | 115-128 | 2-3 | ||||
Sequence: TGGTYGQQGHTGTA | ||||||
Repeat | 135-148 | 2-4 | ||||
Sequence: TNGTYGEHGHTGTA | ||||||
Repeat | 149-162 | 2-5 | ||||
Sequence: TGGSYGEQRHTGVT | ||||||
Repeat | 170-192 | 1-3 | ||||
Sequence: GEKKSLMENIKEKLPGGHGDNQQ | ||||||
Repeat | 193-206 | 2-6 | ||||
Sequence: TAGTYGQQGHFATG | ||||||
Region | 203-469 | Disordered | ||||
Sequence: FATGTHGTPATGGTYGEQGHAGVTGTGTHGTGEKKGLMENIKDKLPGGHGDHQQTGGTYGQQGHTGAATHGTPAGGGTYEQHGHTGMTGTGTHGTGGKKGVMENIKDKLPGGHSDNQQTGGAYEQQGHTGAATHGTPASGGTYEQHGHTGMTGTGTHGTGEKKAVMENIKDKLPGGHGDHQQTGGAYGQQGHTGTATHGTPAGGGTYEQHGNTGMTGTETHGTTATGGTHGQHGHTGTTGTGTHGTDGVGEKKSLMDKIKDKLPGQH | ||||||
Repeat | 213-226 | 2-7 | ||||
Sequence: TGGTYGEQGHAGVT | ||||||
Repeat | 234-256 | 1-4 | ||||
Sequence: GEKKGLMENIKDKLPGGHGDHQQ | ||||||
Compositional bias | 237-251 | Basic and acidic residues | ||||
Sequence: KGLMENIKDKLPGGH | ||||||
Compositional bias | 256-270 | Polar residues | ||||
Sequence: QTGGTYGQQGHTGAA | ||||||
Repeat | 257-270 | 2-8 | ||||
Sequence: TGGTYGQQGHTGAA | ||||||
Repeat | 277-290 | 2-9 | ||||
Sequence: GGGTYEQHGHTGMT | ||||||
Repeat | 298-320 | 1-5 | ||||
Sequence: GGKKGVMENIKDKLPGGHSDNQQ | ||||||
Compositional bias | 313-358 | Polar residues | ||||
Sequence: GGHSDNQQTGGAYEQQGHTGAATHGTPASGGTYEQHGHTGMTGTGT | ||||||
Repeat | 321-334 | 2-10 | ||||
Sequence: TGGAYEQQGHTGAA | ||||||
Repeat | 341-354 | 2-11 | ||||
Sequence: SGGTYEQHGHTGMT | ||||||
Repeat | 362-384 | 1-6 | ||||
Sequence: GEKKAVMENIKDKLPGGHGDHQQ | ||||||
Compositional bias | 365-379 | Basic and acidic residues | ||||
Sequence: KAVMENIKDKLPGGH | ||||||
Repeat | 385-398 | 2-12 | ||||
Sequence: TGGAYGQQGHTGTA | ||||||
Compositional bias | 385-447 | Polar residues | ||||
Sequence: TGGAYGQQGHTGTATHGTPAGGGTYEQHGNTGMTGTETHGTTATGGTHGQHGHTGTTGTGTHG | ||||||
Repeat | 405-418 | 2-13 | ||||
Sequence: GGGTYEQHGNTGMT | ||||||
Repeat | 428-441 | 2-14 | ||||
Sequence: TGGTHGQHGHTGTT | ||||||
Repeat | 452-469 | 1-7 | ||||
Sequence: GEKKSLMDKIKDKLPGQH | ||||||
Compositional bias | 452-469 | Basic and acidic residues | ||||
Sequence: GEKKSLMDKIKDKLPGQH |
Domain
Contains 7 A-type repeats and 14 B-type repeats similar to those found in maize, rice and barley dehydrin and rab proteins.
Sequence similarities
Belongs to the plant dehydrin family.
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length469
- Mass (Da)46,797
- Last updated1995-11-01 v1
- ChecksumA47A16CFFB5B0E1E
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 94-112 | Polar residues | ||||
Sequence: QTGGTYGQQGHTGTATHGT | ||||||
Compositional bias | 237-251 | Basic and acidic residues | ||||
Sequence: KGLMENIKDKLPGGH | ||||||
Compositional bias | 256-270 | Polar residues | ||||
Sequence: QTGGTYGQQGHTGAA | ||||||
Compositional bias | 313-358 | Polar residues | ||||
Sequence: GGHSDNQQTGGAYEQQGHTGAATHGTPASGGTYEQHGHTGMTGTGT | ||||||
Compositional bias | 365-379 | Basic and acidic residues | ||||
Sequence: KAVMENIKDKLPGGH | ||||||
Compositional bias | 385-447 | Polar residues | ||||
Sequence: TGGAYGQQGHTGTATHGTPAGGGTYEQHGNTGMTGTETHGTTATGGTHGQHGHTGTTGTGTHG | ||||||
Compositional bias | 452-469 | Basic and acidic residues | ||||
Sequence: GEKKSLMDKIKDKLPGQH |
Keywords
- Technical term