P46525 · CS120_WHEAT

  • Protein
    Cold-shock protein CS120
  • Gene
    CS120
  • Status
    UniProtKB reviewed (Swiss-Prot)
  • Amino acids
  • Protein existence
    Evidence at transcript level
  • Annotation score
    3/5

Function

function

May reduce intracellular freezing damage during winter by hydrogen-bonding to the lattice of the nascent ice crystals, thus modifying the structure and/or propagation of ice crystals.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Biological Processcold acclimation
Biological Processresponse to abscisic acid
Biological Processresponse to water deprivation

Names & Taxonomy

Protein names

  • Recommended name
    Cold-shock protein CS120

Gene names

    • Name
      CS120

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Norstar
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Poales > Poaceae > BOP clade > Pooideae > Triticodae > Triticeae > Triticinae > Triticum

Accessions

  • Primary accession
    P46525

Proteomes

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00001000631-391Cold-shock protein CS120

Proteomic databases

Expression

Induction

Specifically induced by cold temperatures.

Gene expression databases

Interaction

Protein-protein interaction databases

Family & Domains

Features

Showing features for repeat, region, compositional bias.

TypeIDPosition(s)Description
Repeat9-311-1
Region9-3916 X 23 AA approximate repeats
Compositional bias21-35Basic and acidic residues
Region21-391Disordered
Repeat49-622-1
Region49-36311 X 14 AA approximate repeats
Compositional bias72-89Basic and acidic residues
Repeat72-941-2
Compositional bias91-152Polar residues
Repeat95-1082-2
Repeat115-1282-3
Repeat135-1482-4
Repeat156-1781-3
Compositional bias159-173Basic and acidic residues
Compositional bias178-198Polar residues
Repeat179-1922-5
Repeat199-2122-6
Repeat220-2421-4
Compositional bias223-237Basic and acidic residues
Compositional bias242-264Polar residues
Repeat243-2562-7
Repeat263-2762-8
Repeat284-3061-5
Compositional bias287-301Basic and acidic residues
Compositional bias306-326Polar residues
Repeat307-3202-9
Repeat327-3402-10
Compositional bias343-369Polar residues
Repeat350-3632-11
Repeat374-3911-6
Compositional bias374-391Basic and acidic residues

Domain

Contains 6 A-type repeats and 11 B-type repeats similar to those found in maize, rice and barley dehydrin and rab proteins.

Sequence similarities

Belongs to the plant dehydrin family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    391
  • Mass (Da)
    38,898
  • Last updated
    2005-06-21 v2
  • Checksum
    E53CB63E80B1F43B
MENQAHIAGEKKGIMEKIKEKLPGGHGDHKETAGTHGHPGTATHGAPATGGAYGQQGHAGTTGTGLHGAHAGEKKGVMENIKDKLPGGHQDHQQTGGTYGQQGHTGTATHGTPATGGTYGQQGHTGTATHGTPATGGTYGEQGHTGVTGTGTHGTGEKKGVMENIKEKLPGGHGDHQQTGGTYGQQGHTGTATHGTPAGGGTYEQHGHTGMTGTGTHGTGEKKGVMENIKDKLPGGHGDHQQTGGTYGQQGHTGTATQGTPAGGGTYEQHGHTGMTGAGTHSTGEKKGVMENIKEKLPGGHSDHQQTGGAYGQQGHTGTATHGTPAGGGTYGQHGHAGVIGTETHGTTATGGTHGQHGHTGTTGTGTHGSDGIGEKKSLMDKIKDKLPGQH

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias21-35Basic and acidic residues
Compositional bias72-89Basic and acidic residues
Compositional bias91-152Polar residues
Compositional bias159-173Basic and acidic residues
Compositional bias178-198Polar residues
Compositional bias223-237Basic and acidic residues
Compositional bias242-264Polar residues
Compositional bias287-301Basic and acidic residues
Compositional bias306-326Polar residues
Compositional bias343-369Polar residues
Compositional bias374-391Basic and acidic residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
M93342
EMBL· GenBank· DDBJ
AAA34261.2
EMBL· GenBank· DDBJ
mRNA

Similar Proteins

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