P42793 · RM05_ARATH

Function

Miscellaneous

A stretch of 270 kb of the mitochondrial genome is duplicated within the centromere of chromosome 2 resulting in the duplication of the gene. The expression of this duplicated gene (At2g07725) is demonstrated.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytosolic large ribosomal subunit
Cellular Componentmitochondrion
Molecular FunctionRNA binding
Molecular Functionstructural constituent of ribosome
Biological Processtranslation

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Large ribosomal subunit protein uL5m
  • Alternative names
    • 60S ribosomal protein L5, mitochondrial

Gene names

    • Name
      RPL5
    • Ordered locus names
      AtMg00210

Encoded on

  • Mitochondrion

Organism names

  • Taxonomic identifier
  • Strains
    • cv. Columbia
    • cv. C24
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    P42793
  • Secondary accessions
    • A0A2P2CLF8
    • P93288
    • Q33886
    • Q8S8I8

Proteomes

Organism-specific databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00001250731-185Large ribosomal subunit protein uL5m

Proteomic databases

Expression

Gene expression databases

Interaction

Subunit

Component of the mitochondrial ribosome large subunit.

Protein-protein interaction databases

Family & Domains

Sequence similarities

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    185
  • Mass (Da)
    21,235
  • Last updated
    1995-11-01 v1
  • Checksum
    CB934DC964D9117F
MFPLNFHYEDVLRQDLLLKLNYANVMEVPGLCEIRVVPKAPYNFIIKNGKLAMEIPCGQKFIQTQRGSTGKSFRSNPFLGSNKDKGYVSDLARQSTLRGHGMSNFLVRILTVMSLLDFPVEIRKNSIQFSMETEFCEFSPELEDHFEIFEHIRGFNVTIITSANTQDETLLLWSGFLQKDEGETQ

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
Q6NMS1Q6NMS1_ARATHrpl5185

Features

Showing features for sequence conflict.

TypeIDPosition(s)Description
Sequence conflict92-98in Ref. 7; CAA46239

RNA Editing

Edited at positions 12
16
20
22
31
57
106
110
171

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
X67736
EMBL· GenBank· DDBJ
CAA47967.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
Y08501
EMBL· GenBank· DDBJ
CAA69765.3
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
BK010421
EMBL· GenBank· DDBJ
DAB41507.2
EMBL· GenBank· DDBJ
Genomic DNA
AC006225
EMBL· GenBank· DDBJ
AAM15173.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
BT010679
EMBL· GenBank· DDBJ
AAR20736.1
EMBL· GenBank· DDBJ
mRNA Sequence problems.
X65123
EMBL· GenBank· DDBJ
CAA46239.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp