P34788 · RS18_ARATH
- ProteinSmall ribosomal subunit protein uS13z/uS13y/uS13x
- GeneRPS18A; RPS18B; RPS18C
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids152 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score4/5
Function
function
Located at the top of the head of the 40S subunit, it contacts several helices of the 18S rRNA.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | cytosol | |
Cellular Component | cytosolic ribosome | |
Cellular Component | cytosolic small ribosomal subunit | |
Cellular Component | nucleolus | |
Cellular Component | nucleus | |
Cellular Component | plant-type cell wall | |
Cellular Component | plant-type vacuole | |
Cellular Component | plasma membrane | |
Cellular Component | plasmodesma | |
Molecular Function | mRNA binding | |
Molecular Function | rRNA binding | |
Molecular Function | structural constituent of ribosome | |
Biological Process | translational initiation |
Keywords
- Molecular function
Names & Taxonomy
Protein names
- Recommended nameSmall ribosomal subunit protein uS13z/uS13y/uS13x
- Alternative names
Gene names
Organism names
- Strains
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionP34788
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
PTM/Processing
Features
Showing features for initiator methionine, modified residue, chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Initiator methionine | 1 | Removed | ||||
Sequence: M | ||||||
Modified residue | 2 | N-acetylserine | ||||
Sequence: S | ||||||
Chain | PRO_0000132224 | 2-152 | Small ribosomal subunit protein uS13z/uS13y/uS13x | |||
Sequence: SLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRLANIVCKKADVDMNKRAGELSAAEIDNLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR |
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Gene expression databases
Structure
Sequence
- Sequence statusComplete
- Length152
- Mass (Da)17,545
- Last updated1994-02-01 v1
- Checksum4D060D6614A85092
Features
Showing features for sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Sequence conflict | 48 | in Ref. 6; AAK43840/AAL47385 | ||||
Sequence: A → T |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
Z23165 EMBL· GenBank· DDBJ | CAA80684.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
Z28701 EMBL· GenBank· DDBJ | CAA82273.1 EMBL· GenBank· DDBJ | mRNA | ||
Z28702 EMBL· GenBank· DDBJ | CAA82274.1 EMBL· GenBank· DDBJ | mRNA | ||
Z28962 EMBL· GenBank· DDBJ | CAA82275.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
Y12227 EMBL· GenBank· DDBJ | CAA72909.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AC003979 EMBL· GenBank· DDBJ | AAC25506.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AC015446 EMBL· GenBank· DDBJ | AAG12534.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AC079286 EMBL· GenBank· DDBJ | AAG12853.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AL049482 EMBL· GenBank· DDBJ | CAB39647.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AL161515 EMBL· GenBank· DDBJ | CAB78103.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002684 EMBL· GenBank· DDBJ | AEE30287.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002684 EMBL· GenBank· DDBJ | AEE31659.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002687 EMBL· GenBank· DDBJ | AEE82800.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AF411781 EMBL· GenBank· DDBJ | AAL06471.1 EMBL· GenBank· DDBJ | mRNA | ||
AF386941 EMBL· GenBank· DDBJ | AAK62386.1 EMBL· GenBank· DDBJ | mRNA | ||
AF370463 EMBL· GenBank· DDBJ | AAK43840.1 EMBL· GenBank· DDBJ | mRNA | ||
AY034965 EMBL· GenBank· DDBJ | AAK59471.1 EMBL· GenBank· DDBJ | mRNA | ||
AY064680 EMBL· GenBank· DDBJ | AAL47385.1 EMBL· GenBank· DDBJ | mRNA | ||
AY070029 EMBL· GenBank· DDBJ | AAL47500.1 EMBL· GenBank· DDBJ | mRNA | ||
AY086334 EMBL· GenBank· DDBJ | AAM64403.1 EMBL· GenBank· DDBJ | mRNA | ||
AY086800 EMBL· GenBank· DDBJ | AAM63849.1 EMBL· GenBank· DDBJ | mRNA | ||
BT006539 EMBL· GenBank· DDBJ | AAP21347.1 EMBL· GenBank· DDBJ | mRNA | ||
AY087428 EMBL· GenBank· DDBJ | AAM64976.1 EMBL· GenBank· DDBJ | mRNA |