Cloning and characterization of an Arabidopsis thaliana topoisomerase I gene.Kieber J.J., Tissier A.F., Signer E.R.View abstractCited forNUCLEOTIDE SEQUENCE [MRNA], FUNCTIONStraincv. ColumbiaCategoriesFunction, SequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Physiol. 99:1493-1501 (1992)Cited in1Mapped to2
Structural analysis of Arabidopsis thaliana chromosome 5. VII. Sequence features of the regions of 1,013,767 bp covered by sixteen physically assigned P1 and TAC clones.Nakamura Y., Sato S., Asamizu E., Kaneko T., Kotani H., Miyajima N., Tabata S.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]Straincv. ColumbiaCategoriesSequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCDNA Res. 5:297-308 (1998)Cited in99+94
Araport11: a complete reannotation of the Arabidopsis thaliana reference genome.Cheng C.Y., Krishnakumar V., Chan A.P., Thibaud-Nissen F., Schobel S., Town C.D.View abstractCited forGENOME REANNOTATIONStraincv. ColumbiaCategoriesSequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant J. 89:789-804 (2017)Cited in99+99+
Empirical analysis of transcriptional activity in the Arabidopsis genome.Yamada K., Lim J., Dale J.M., Chen H., Shinn P., Palm C.J., Southwick A.M., Wu H.C., Kim C.J.[...], Ecker J.R.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 403-916Straincv. ColumbiaCategoriesSequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 302:842-846 (2003)Cited in99+Mapped to2
Large-scale analysis of RIKEN Arabidopsis full-length (RAFL) cDNAs.Totoki Y., Seki M., Ishida J., Nakajima M., Enju A., Kamiya A., Narusaka M., Shin-i T., Nakagawa M.[...], Shinozaki K.Cited forNUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] OF 521-916Straincv. ColumbiaCategoriesSequencesSourceUniProtKB reviewed (Swiss-Prot)Submission Submitted to EMBL/GenBank/DDBJ databases (MAR-2005)Cited in99+99+
Disruption of a DNA topoisomerase I gene affects morphogenesis in Arabidopsis.Takahashi T., Matsuhara S., Abe M., Komeda Y.View abstractCited forFUNCTION, DISRUPTION PHENOTYPECategoriesFunction, Phenotypes & VariantsSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Cell 14:2085-2093 (2002)Cited in2Mapped to2
Site-specific phosphorylation profiling of Arabidopsis proteins by mass spectrometry and peptide chip analysis.de la Fuente van Bentem S., Anrather D., Dohnal I., Roitinger E., Csaszar E., Joore J., Buijnink J., Carreri A., Forzani C.[...], Hirt H.View abstractCited forPHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-170, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]TissueRootCategoriesPTM / Processing, SequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Proteome Res. 7:2458-2470 (2008)Cited in99+99+Mapped to99+
Phosphoproteomic analysis of nuclei-enriched fractions from Arabidopsis thaliana.Jones A.M.E., MacLean D., Studholme D.J., Serna-Sanz A., Andreasson E., Rathjen J.P., Peck S.C.View abstractCited forSUBCELLULAR LOCATION, PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-170, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]Straincv. ColumbiaCategoriesPTM / Processing, Sequences, Subcellular LocationSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Proteomics 72:439-451 (2009)Cited in99+99+
Large-scale Arabidopsis phosphoproteome profiling reveals novel chloroplast kinase substrates and phosphorylation networks.Reiland S., Messerli G., Baerenfaller K., Gerrits B., Endler A., Grossmann J., Gruissem W., Baginsky S.View abstractCited forPHOSPHORYLATION [LARGE SCALE ANALYSIS] AT THR-286, IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]CategoriesPTM / Processing, SequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Physiol. 150:889-903 (2009)Cited in99+99+Mapped to1
MGOUN1 encodes an Arabidopsis type IB DNA topoisomerase required in stem cell regulation and to maintain developmentally regulated gene silencing.Graf P., Dolzblasz A., Wuerschum T., Lenhard M., Pfreundt U., Laux T.View abstractCited forFUNCTION, TISSUE SPECIFICITY, DISRUPTION PHENOTYPECategoriesFunction, Expression, Phenotypes & VariantsSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Cell 22:716-728 (2010)Cited in1Mapped to3
DNA topoisomerase I affects polycomb group protein-mediated epigenetic regulation and plant development by altering nucleosome distribution in Arabidopsis.Liu X., Gao L., Dinh T.T., Shi T., Li D., Wang R., Guo L., Xiao L., Chen X.View abstractCited forFUNCTIONCategoriesFunctionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Cell 26:2803-2817 (2014)Cited in1Mapped to9
A DEK domain-containing protein modulates chromatin structure and function in Arabidopsis.Waidmann S., Kusenda B., Mayerhofer J., Mechtler K., Jonak C.View abstractCited forINTERACTION WITH DEK3, IDENTIFICATION BY MASS SPECTROMETRYStraincv. ColumbiaCategoriesSequences, InteractionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPlant Cell 26:4328-4344 (2014)Cited in18Mapped to11
DNA topoisomerase 1alpha promotes transcriptional silencing of transposable elements through DNA methylation and histone lysine 9 dimethylation in Arabidopsis.Dinh T.T., Gao L., Liu X., Li D., Li S., Zhao Y., O'Leary M., Le B., Schmitz R.J.[...], Chen X.View abstractCited forFUNCTIONCategoriesFunctionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCPLoS Genet. 10:E1004446-E1004446 (2014)Cited in1Mapped to4
MGOUN1 and MGOUN2: two genes required for primordium initiation at the shoot apical and floral meristems in Arabidopsis thaliana.Laufs P., Dockx J., Kronenberger J., Traas J.View abstractCategoriesFunction, Phenotypes & Variants, Function, Phenotypes & VariantsSourcepGenN:9477323, pGenN:9477323, TAIR: AT5G55300PubMedEurope PMCDevelopment 125:1253-1260 (1998)Mapped to6
Cloning of a cDNA encoding DNA topoisomerase I in Daucus carota and expression analysis in relation to cell proliferation.Balestrazzi A., Toscano I., Bernacchia G., Luo M., Otte S., Carbonera D.View abstractCategoriesSequencesSourceTAIR: AT5G55300PubMedEurope PMCGene 183:183-190 (1996)Cited in1Mapped to3
Histidine kinase inhibitors impair shoot regeneration in <i>Arabidopsis thaliana via</i> cytokinin signaling and SAM patterning determinants.Lardon R., Trinh H.K., Xu X., Vu L.D., Van De Cotte B., Pernisova M., Vanneste S., De Smet I., Geelen D.View abstractSourceTAIR: AT5G55300PubMedEurope PMCFront Plant Sci 13:894208-894208 (2022)Mapped to32
TOP1alpha suppresses lateral root gravitropism in Arabidopsis.Zhang H., Tang Z., Zhang Y., Liu L., Zhao D., Liu X., Guo L., Dong J.View abstractSourceTAIR: AT5G55300PubMedEurope PMCPlant Signal Behav 17:2098646-2098646 (2022)Mapped to7
TOP1alpha fine-tunes TOR-PLT2 to maintain root tip homeostasis in response to sugars.Zhang H., Guo L., Li Y., Zhao D., Liu L., Chang W., Zhang K., Zheng Y., Hou J.[...], Liu X.View abstractSourceTAIR: AT5G55300PubMedEurope PMCNat Plants 8:792-801 (2022)Mapped to8
Profiling thimet oligopeptidase-mediated proteolysis in Arabidopsis thaliana.Iannetta A.A., Rogers H.T., Al-Mohanna T., O'Brien J.N., Wommack A.J., Popescu S.C., Hicks L.M.View abstractAnnotationProfiling thimet oligopeptidase-mediated proteolysis in Arabidopsis thaliana.CategoriesFunction, Phenotypes & VariantsSourceGeneRif: 835623PubMedEurope PMCPlant J 106:336-350 (2021)Mapped to7
TOP1alpha, UPF1, and TTG2 regulate seed size in a parental dosage- dependent manner.Li C., Gong X., Zhang B., Liang Z., Wong C.E., See B.Y.H., Yu H.View abstractAnnotationTOP1alpha UPF1 and TTG2 regulate seed size in a parental dosage-dependent manner.CategoriesFunction, Phenotypes & VariantsSourceGeneRif: 835623PubMedEurope PMCPLoS Biol 18:e3000930-e3000930 (2020)Mapped to11
TOP1alpha regulates pii>FLOWERING LOCUS Cpi/i> expression by coupling histone modification and transcription machinery.Zhong P., Li J., Luo L., Zhao Z., Tian Z.View abstractAnnotationTOP1alpha has a role in regulating FLOWERING LOCUS C expression by coupling histone modification and transcription machineryCategoriesFunctionSourceGeneRif: 835623PubMedEurope PMCDevelopment 146:dev167841-dev167841 (2019)Mapped to10
The Tyrosyl-DNA Phosphodiesterase 1beta (Tdp1beta) Gene Discloses an Early Response to Abiotic Stresses.Sabatini M.E., Pagano A., Araujo S., Balestrazzi A., Macovei A.View abstractCategoriesExpressionSourceTAIR: AT5G55300PubMedEurope PMCGenes (Basel) 8:E305-E305 (2017)Mapped to5
<i>Arabidopsis</i> DNA topoisomerase I alpha is required for adaptive response to light and flower development.Kupriyanova E.V., Albert E.V., Bliznina A.I., Mamoshina P.O., Ezhova T.A.View abstractCategoriesFunction, Phenotypes & VariantsSourceTAIR: AT5G55300PubMedEurope PMCBiol Open 6:832-843 (2017)Mapped to3
DNA Topoisomerase Ialpha Affects the Floral Transition.Gong X., Shen L., Peng Y.Z., Gan Y., Yu H.View abstractAnnotationTOP1ALPHA role in floweringCategoriesFunction, Phenotypes & VariantsSourceGeneRif: 835623, TAIR: AT5G55300PubMedEurope PMCPlant Physiol 173:642-654 (2017)Mapped to23
TOPOISOMERASE1alpha Acts through Two Distinct Mechanisms to Regulate Stele and Columella Stem Cell Maintenance.Zhang Y., Zheng L., Hong J.H., Gong X., Zhou C., Perez-Perez J.M., Xu J.View abstractAnnotationTOP1alpha is required for the survival of stele stem cells and regulates the differentiation state and number of columella stem cells.CategoriesFunction, Phenotypes & VariantsSourceGeneRif: 835623, TAIR: AT5G55300PubMedEurope PMCPlant Physiol 171:483-493 (2016)Mapped to8