P16688 · PHNJ_ECOLI
- ProteinAlpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase
- GenephnJ
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids281 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
Catalyzes the breakage of the C-P bond in alpha-D-ribose 1-methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose 1,2-cyclic phosphate 5-phosphate (PRcP).
Miscellaneous
The sequence shown is that of strain K12.
Catalytic activity
- AH2 + alpha-D-ribose 1-methylphosphonate 5-phosphate + S-adenosyl-L-methionine = 5'-deoxyadenosine + A + alpha-D-ribose 1,2-cyclic phosphate 5-phosphate + H+ + L-methionine + methane
Cofactor
Note: Binds 1 [4Fe-4S] cluster per subunit.
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase complex | |
Cellular Component | carbon phosphorus lyase complex | |
Molecular Function | 4 iron, 4 sulfur cluster binding | |
Molecular Function | alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase activity | |
Molecular Function | lyase activity | |
Molecular Function | metal ion binding | |
Biological Process | organic phosphonate catabolic process | |
Biological Process | organic phosphonate metabolic process | |
Biological Process | organic phosphonate transport |
Keywords
- Molecular function
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameAlpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase
- EC number
- Short namesPRPn C-P lyase
Gene names
Organism names
- Organism
- Strains
- Taxonomic lineageBacteria > Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia
Accessions
- Primary accessionP16688
- Secondary accessions
Proteomes
Subcellular Location
Phenotypes & Variants
Features
Showing features for natural variant.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Natural variant | 103 | in strain: B | ||||
Sequence: V → L |
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 1 variant from UniProt as well as other sources including ClinVar and dbSNP.
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000058397 | 1-281 | Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P lyase | |||
Sequence: MANLSGYNFAYLDEQTKRMIRRAILKAVAIPGYQVPFGGREMPMPYGWGTGGIQLTASVIGESDVLKVIDQGADDTTNAVSIRNFFKRVTGVNTTERTDDATVIQTRHRIPETPLTEDQIIIFQVPIPEPLRFIEPRETETRTMHALEEYGVMQVKLYEDIARFGHIATTYAYPVKVNGRYVMDPSPIPKFDNPKMDMMPALQLFGAGREKRIYAVPPFTRVESLDFDDHPFTVQQWDEPCAICGSTHSYLDEVVLDDAGNRMFVCSDTDYCRQQSEAKNQ |
Proteomic databases
Interaction
Subunit
Forms a complex with PhnG, PhnH, PhnI and PhnK with the suggested composition PhnG4H2I2J2K.
Protein-protein interaction databases
Structure
Sequence
- Sequence statusComplete
- Length281
- Mass (Da)31,845
- Last updated1991-11-01 v2
- Checksum241F6AF140995468
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
J05260 EMBL· GenBank· DDBJ | AAA24348.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
D90227 EMBL· GenBank· DDBJ | BAA14270.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
U14003 EMBL· GenBank· DDBJ | AAA96997.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
U00096 EMBL· GenBank· DDBJ | AAC77059.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AP009048 EMBL· GenBank· DDBJ | BAE78101.1 EMBL· GenBank· DDBJ | Genomic DNA |