P0DKJ6 · GDL4_ARATH

Function

Features

Showing features for active site.

140250100150200250300350400
TypeIDPosition(s)Description
Active site85Nucleophile
Active site375
Active site378

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentextracellular region
Molecular Functionlipase activity
Biological Processlipid catabolic process

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    GDSL esterase/lipase At1g20120
  • EC number
  • Alternative names
    • Extracellular lipase At1g20120

Gene names

    • ORF names
      T20H2.10
    • Ordered locus names
      At1g20120

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    P0DKJ6
  • Secondary accessions
    • Q8LD23
    • Q9LNT7

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for signal, chain, glycosylation.

Type
IDPosition(s)Description
Signal1-35
ChainPRO_000036734636-402GDSL esterase/lipase At1g20120
Glycosylation73N-linked (GlcNAc...) asparagine
Glycosylation314N-linked (GlcNAc...) asparagine
Glycosylation367N-linked (GlcNAc...) asparagine

Keywords

Proteomic databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for region, compositional bias.

Type
IDPosition(s)Description
Region41-69Disordered
Compositional bias44-64Pro residues

Sequence similarities

Belongs to the 'GDSL' lipolytic enzyme family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.
  • Length
    402
  • Mass (Da)
    44,222
  • Last updated
    2015-10-14 v1
  • Checksum
    88EA57C0CE797703
MLQDRVSGSLSSSKISRCVLFLSLFCFFLLTMHASANRLQRVPNPGPSPAPEPKPCPSPGPNPAPATTKRTHNTTFPAIFAFGDSILDTGNNDYILTLIKANFLPYGMNFPDKVPTGRFCNGKIPSDFIADYIGVKPVVPAYLRPGLTQEDLLTGVSFASGGSGYDPLTPIVVSAIPMSKQLTYFQEYIEKVKGFVGKEKAEHIISKGLAIVVAGSDDLANTYYGEHLEEFLYDIDTYTSFMASSAASFAMQLYESGAKKIGFIGVSPIGCIPIQRTTRGGLKRKCADELNFAAQLFNSKLSTSLNELAKTMKNTTLVYIDIYSSFNDMIQNPKKYGFDEIDRGCCGTGLLELGPLCNKYTSLLCKNVSSFMFWDSYHPTERAYKILSQKFVENDMGPFYDN

Sequence caution

The sequence AAF79901.1 differs from that shown. Reason: Erroneous gene model prediction The predicted gene At1g20110 has been split into 2 genes: At1g20110 and At1g20120.

Features

Showing features for sequence conflict, compositional bias.

Type
IDPosition(s)Description
Sequence conflict8in Ref. 3; AAM64323
Compositional bias44-64Pro residues
Sequence conflict300in Ref. 3; AAM64323
Sequence conflict402in Ref. 3; AAM64323

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AC022472
EMBL· GenBank· DDBJ
AAF79901.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
CP002684
EMBL· GenBank· DDBJ
AEE29938.1
EMBL· GenBank· DDBJ
Genomic DNA
AY086248
EMBL· GenBank· DDBJ
AAM64323.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

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