P0DKH9 · AREP1_ARATH

Function

function

Negative regulator of the auxin response.

Miscellaneous

Knock-down mutants have no visible phenotype in the absence of exogenous auxin, but are more sensitive to auxin-induced inhibition of root elongation and initiation of lateral roots.

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componentmembrane
Cellular Componentnucleus
Biological Processauxin-activated signaling pathway
Biological Processnegative regulation of auxin mediated signaling pathway
Biological Processroot development

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Auxin-responsive endogenous peptide 1

Gene names

    • Name
      AREP1
    • ORF names
      F6F3
    • Ordered locus names
      At1g01335

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    P0DKH9

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Cytoplasm
Nucleus
Membrane
; Single-pass membrane protein
Note: Not localized under normal conditions, but found in the cytoplasm and in the nucleus when auxin is added.

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane7-29Helical

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00004314251-40Auxin-responsive endogenous peptide 1

Expression

Tissue specificity

Expressed in cotyledons, hypocotyls, roots, newly developing leaves and shoot apical meristem. Not detected in flowers, siliques or mature leaves.

Induction

Up-regulated by auxin.

Developmental stage

Expressed during the primary developmental stages.

Interaction

Protein-protein interaction databases

Family & Domains

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    40
  • Mass (Da)
    4,747
  • Last updated
    2015-01-07 v1
  • Checksum
    F9C5C75E99E2CE63
MGLSDCLIYRLVVRCFLDYSICAPFYFYHKFMLSASEPVF

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AC023628
EMBL· GenBank· DDBJ
-Genomic DNA No translation available.
CP002684
EMBL· GenBank· DDBJ
ANM60886.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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