P0DI43 · CASP1_THECC

Function

function

Regulates membrane-cell wall junctions and localized cell wall deposition. Required for establishment of the Casparian strip membrane domain (CSD) and the subsequent formation of Casparian strips, a cell wall modification of the root endodermis that determines an apoplastic barrier between the intraorganismal apoplasm and the extraorganismal apoplasm and prevents lateral diffusion (By similarity).

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentplasma membrane
Biological Processcell wall organization

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Casparian strip membrane protein 1
  • Short names
    TcCASP1

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Malvales > Malvaceae > Byttnerioideae > Theobroma

Accessions

  • Primary accession
    P0DI43

Proteomes

Genome annotation databases

Subcellular Location

Cell membrane
; Multi-pass membrane protein
Note: Very restricted localization following a belt shape within the plasma membrane which coincides with the position of the Casparian strip membrane domain in the root endodermis.

Features

Showing features for topological domain, transmembrane.

TypeIDPosition(s)Description
Topological domain1-38Cytoplasmic
Transmembrane39-59Helical
Topological domain60-86Extracellular
Transmembrane87-107Helical
Topological domain108-121Cytoplasmic
Transmembrane122-142Helical
Topological domain143-171Extracellular
Transmembrane172-192Helical
Topological domain193-200Cytoplasmic

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00004178091-200Casparian strip membrane protein 1

Interaction

Subunit

Homodimer and heterodimers.

Family & Domains

Sequence similarities

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    200
  • Mass (Da)
    21,120
  • Last updated
    2012-06-13 v1
  • Checksum
    FE91F0CA8A8DB0EA
MKSGDHAAIDVPESSAVAKGKAPLIATPREQKSGFKKGLGIFDFLLRLGAIIAALAAAATMGTSDETLPFFTQFFQFEASYDDLPTFMFFVIAMALIGGYLVLSLPFSIVTIVRPHAVAPRLLLFILDIVALTLTTAAGAAAAAIVYLAHNGNPNTNWLAICQQFGDFCQEVSGAVVASFVTVVVLMSLVLLSGVALKKH

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CU571771
EMBL· GenBank· DDBJ
-mRNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

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