P0CX71 · YE11A_YEAST
- ProteinTransposon Ty1-ER1 Gag polyprotein
- GeneTY1A-ER1
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids440 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score3/5
Function
function
Miscellaneous
Features
Showing features for site.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Site | 401-402 | Cleavage; by Ty1 protease | ||||
Sequence: HN |
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Molecular Function | RNA binding | |
Biological Process | viral translational frameshifting |
Keywords
- Molecular function
Names & Taxonomy
Protein names
- Recommended nameTransposon Ty1-ER1 Gag polyprotein
- Alternative names
- Cleaved into 2 chains
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Fungi > Dikarya > Ascomycota > Saccharomycotina > Saccharomycetes > Saccharomycetales > Saccharomycetaceae > Saccharomyces
Accessions
- Primary accessionP0CX71
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
PTM/Processing
Features
Showing features for chain, peptide, modified residue.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000409792 | 1-401 | Capsid protein | |||
Sequence: MESQQLSQHSPISHGSACASVTSKEVHTNQDPLDVSASKTEECEKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFPPGPQSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPMLTSPNDFPNWVKTYIKFLQNSNLGGIIPTVNGKPVRQITDDELTFLYNTFQIFAPSQFLPTWVKDILSVDYTDIMKILSKSIEKMQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAELFLDIHAIYEEQQGSRNSKPNYRRNLSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARAH | ||||||
Chain | PRO_0000409791 | 1-440 | Transposon Ty1-ER1 Gag polyprotein | |||
Sequence: MESQQLSQHSPISHGSACASVTSKEVHTNQDPLDVSASKTEECEKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQNQANPSGWSFYGHPSMIPYTPYQMSPMYFPPGPQSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPMLTSPNDFPNWVKTYIKFLQNSNLGGIIPTVNGKPVRQITDDELTFLYNTFQIFAPSQFLPTWVKDILSVDYTDIMKILSKSIEKMQSDTQEANDIVTLANLQYNGSTPADAFETKVTNIIDRLNNNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAELFLDIHAIYEEQQGSRNSKPNYRRNLSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARAHNVSTSNNSPSTDNDSISKSTTEPIQLNNKHDLHLRPGTY | ||||||
Peptide | PRO_0000409793 | 402-440 | Gag-p4 | |||
Sequence: NVSTSNNSPSTDNDSISKSTTEPIQLNNKHDLHLRPGTY | ||||||
Modified residue | 416 | Phosphoserine | ||||
Sequence: S |
Keywords
- PTM
Expression
Induction
Structure
Family & Domains
Features
Showing features for compositional bias, region.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-36 | Polar residues | ||||
Sequence: MESQQLSQHSPISHGSACASVTSKEVHTNQDPLDVS | ||||||
Region | 1-93 | Disordered | ||||
Sequence: MESQQLSQHSPISHGSACASVTSKEVHTNQDPLDVSASKTEECEKASTKANSQQTTTPASSAVPENPHHASPQPASVPPPQNGPYPQQCMMTQ | ||||||
Compositional bias | 47-67 | Polar residues | ||||
Sequence: STKANSQQTTTPASSAVPENP | ||||||
Compositional bias | 71-85 | Pro residues | ||||
Sequence: SPQPASVPPPQNGPY | ||||||
Region | 126-174 | Disordered | ||||
Sequence: PQSQFPQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTSTKKYVRPPPM | ||||||
Compositional bias | 131-164 | Polar residues | ||||
Sequence: PQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTS | ||||||
Region | 299-401 | RNA-binding | ||||
Sequence: NNGIHINNKVACQLIMRGLSGEYKFLRYTRHRHLNMTVAELFLDIHAIYEEQQGSRNSKPNYRRNLSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARAH | ||||||
Region | 352-440 | Disordered | ||||
Sequence: GSRNSKPNYRRNLSDEKNDSRSYTNTTKPKVIARNPQKTNNSKSKTARAHNVSTSNNSPSTDNDSISKSTTEPIQLNNKHDLHLRPGTY | ||||||
Compositional bias | 360-374 | Basic and acidic residues | ||||
Sequence: YRRNLSDEKNDSRSY | ||||||
Compositional bias | 375-428 | Polar residues | ||||
Sequence: TNTTKPKVIARNPQKTNNSKSKTARAHNVSTSNNSPSTDNDSISKSTTEPIQLN |
Domain
Phylogenomic databases
Family and domain databases
Sequence & Isoform
- Sequence statusComplete
This entry describes 2 isoforms produced by Ribosomal frameshifting. The Gag-Pol polyprotein is generated by a +1 ribosomal frameshift. The ratio of Gag:Gag-Pol varies between 20:1 and 5:1 (By similarity).
P0CX71-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- NameTransposon Ty1-ER1 Gag polyprotein
- NoteProduced by conventional translation.
- Length440
- Mass (Da)48,953
- Last updated2011-06-28 v1
- ChecksumB3C484A9901A8296
Q03612-1
The sequence of this isoform can be found in the external entry linked below. Isoforms of the same protein are often annotated in two different entries if their sequences differ significantly.
View isoform- NameTransposon Ty1-ER1 Gag-Pol polyprotein
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 1-36 | Polar residues | ||||
Sequence: MESQQLSQHSPISHGSACASVTSKEVHTNQDPLDVS | ||||||
Compositional bias | 47-67 | Polar residues | ||||
Sequence: STKANSQQTTTPASSAVPENP | ||||||
Compositional bias | 71-85 | Pro residues | ||||
Sequence: SPQPASVPPPQNGPY | ||||||
Compositional bias | 131-164 | Polar residues | ||||
Sequence: PQYPSSVGTPLSTPSPESGNTFTDSSSADSDMTS | ||||||
Compositional bias | 360-374 | Basic and acidic residues | ||||
Sequence: YRRNLSDEKNDSRSY | ||||||
Compositional bias | 375-428 | Polar residues | ||||
Sequence: TNTTKPKVIARNPQKTNNSKSKTARAHNVSTSNNSPSTDNDSISKSTTEPIQLN |
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
U18917 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
BK006939 EMBL· GenBank· DDBJ | DAA07798.1 EMBL· GenBank· DDBJ | Genomic DNA |