P0CW02 · LY6C1_MOUSE
- ProteinLymphocyte antigen 6C1
- GeneLy6c1
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids131 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cell surface | |
Cellular Component | external side of plasma membrane |
Names & Taxonomy
Protein names
- Recommended nameLymphocyte antigen 6C1
- Short namesLy-6C1
Gene names
Organism names
- Organism
- Strains
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Mus > Mus
Accessions
- Primary accessionP0CW02
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
PTM/Processing
Features
Showing features for signal, chain, disulfide bond, lipidation, propeptide.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Signal | 1-26 | |||||
Sequence: MDTSHTTKSCVLILLVALLCAERAQG | ||||||
Chain | PRO_0000408033 | 27-109 | Lymphocyte antigen 6C1 | |||
Sequence: LQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAG | ||||||
Disulfide bond | 29↔53 | |||||
Sequence: CYECYGVPIETSCPAVTCRASDGFC | ||||||
Disulfide bond | 32↔41 | |||||
Sequence: CYGVPIETSC | ||||||
Disulfide bond | 46↔74 | |||||
Sequence: CRASDGFCIAQNIELIEDSQRRKLKTRQC | ||||||
Disulfide bond | 78↔95 | |||||
Sequence: CPAGVPIRDPNIRERTSC | ||||||
Disulfide bond | 96↔101 | |||||
Sequence: CSEDLC | ||||||
Lipidation | 109 | GPI-anchor amidated glycine | ||||
Sequence: G | ||||||
Propeptide | PRO_0000408034 | 110-131 | Removed in mature form | |||
Sequence: STWTMAGVLLFSLSSVVLQTLL |
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Gene expression databases
Interaction
Miscellaneous
Structure
Family & Domains
Features
Showing features for domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 27-115 | UPAR/Ly6 | ||||
Sequence: LQCYECYGVPIETSCPAVTCRASDGFCIAQNIELIEDSQRRKLKTRQCLSFCPAGVPIRDPNIRERTSCCSEDLCNAAVPTAGSTWTMA |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
- Length131
- Mass (Da)14,193
- Last updated2011-05-03 v1
- Checksum36DAB8CB8F137CB0
Computationally mapped potential isoform sequences
There are 4 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A087WNZ5 | A0A087WNZ5_MOUSE | Ly6c1 | 147 | ||
A0A087WPW7 | A0A087WPW7_MOUSE | Ly6c1 | 78 | ||
A0A087WRP7 | A0A087WRP7_MOUSE | Ly6c1 | 111 | ||
A0A087WRG9 | A0A087WRG9_MOUSE | Ly6c1 | 81 |
Features
Showing features for sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Sequence conflict | 3-4 | in Ref. 1; AAA39469 | ||||
Sequence: TS → ST | ||||||
Sequence conflict | 6 | in Ref. 1; AAA39469 | ||||
Sequence: T → A | ||||||
Sequence conflict | 11 | in Ref. 1; AAA39469 | ||||
Sequence: V → L | ||||||
Sequence conflict | 22 | in Ref. 1; AAA39469 and 2; BAC40570 | ||||
Sequence: E → G |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
M21734 EMBL· GenBank· DDBJ | AAA39469.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
M21771 EMBL· GenBank· DDBJ | AAA39469.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
M21733 EMBL· GenBank· DDBJ | AAA39469.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AK088782 EMBL· GenBank· DDBJ | BAC40570.1 EMBL· GenBank· DDBJ | mRNA | ||
AK143577 EMBL· GenBank· DDBJ | BAE25446.1 EMBL· GenBank· DDBJ | mRNA | ||
BC010764 EMBL· GenBank· DDBJ | AAH10764.1 EMBL· GenBank· DDBJ | mRNA |