P0CI03 · PTR28_ARATH
- ProteinProtein NRT1/ PTR FAMILY 5.6
- GeneNPF5.6
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids575 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | membrane | |
Molecular Function | dipeptide transmembrane transporter activity | |
Molecular Function | tripeptide transmembrane transporter activity |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Recommended nameProtein NRT1/ PTR FAMILY 5.6
- Short namesAtNPF5.6
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionP0CI03
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Membrane ; Multi-pass membrane protein
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transmembrane | 44-64 | Helical | ||||
Sequence: AALFIIAIEFSERLSYFGLAT | ||||||
Transmembrane | 88-108 | Helical | ||||
Sequence: WSGVTTLMPLLGGFIADAYLG | ||||||
Transmembrane | 113-133 | Helical | ||||
Sequence: VLVATTIYLMGLVLLTMSWFI | ||||||
Transmembrane | 153-173 | Helical | ||||
Sequence: VAFFIAIYLISIGTGGHKPSL | ||||||
Transmembrane | 195-215 | Helical | ||||
Sequence: FFNWWNVSLCAGILTAVTAVA | ||||||
Transmembrane | 223-243 | Helical | ||||
Sequence: WGVAGIILTVVMAISLIIFFI | ||||||
Transmembrane | 339-359 | Helical | ||||
Sequence: LIINVIPIWFSTLAFGICATQ | ||||||
Transmembrane | 375-395 | Helical | ||||
Sequence: IGGFTVPPASMFTLTALTLII | ||||||
Transmembrane | 420-440 | Helical | ||||
Sequence: ILQRIGTGMIFSLITMIIAAL | ||||||
Transmembrane | 457-477 | Helical | ||||
Sequence: VIWLAPQFMVIGFADAFTLVG | ||||||
Transmembrane | 493-513 | Helical | ||||
Sequence: LGIAFYLSVIGAASFLNNLLI | ||||||
Transmembrane | 541-561 | Helical | ||||
Sequence: FYWFLAGVIAANICVFVIVAK |
Keywords
- Cellular component
PTM/Processing
Features
Showing features for chain, modified residue.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Chain | PRO_0000399962 | 1-575 | Protein NRT1/ PTR FAMILY 5.6 | |||
Sequence: MEHKNIGAEVLQDTYDDQQKWVLDSSLDSRGRVPLRARTGAWRAALFIIAIEFSERLSYFGLATNLVVYLTTILNQDLKMAIRNVNYWSGVTTLMPLLGGFIADAYLGRYATVLVATTIYLMGLVLLTMSWFIPGLKPCHQEVCVEPRKAHEVAFFIAIYLISIGTGGHKPSLESFGADQFDDDHVEERKMKMSFFNWWNVSLCAGILTAVTAVAYIEDRVGWGVAGIILTVVMAISLIIFFIGKPFYRYRTPSGSPLTPILQVFVAAIAKRNLPYPSDPSLLHEVSKTEFTSGRLLCHTEHLKFLDKAAIIEDKNPLALEKQSPWRLLTLTKVEETKLIINVIPIWFSTLAFGICATQASTFFIKQAITMDRHIGGFTVPPASMFTLTALTLIISLTVYEKLLVPLLRSITRNQRGINILQRIGTGMIFSLITMIIAALVEKQRLDRTNNNKPMSVIWLAPQFMVIGFADAFTLVGLQEYFYHQVPDSMRSLGIAFYLSVIGAASFLNNLLITAVDTLAENFSGKSWFGKDLNSSRLDRFYWFLAGVIAANICVFVIVAKRCPYKSVQPSQGLS | ||||||
Modified residue | 112 | Phosphothreonine | ||||
Sequence: T |
Keywords
- PTM
Proteomic databases
Expression
Tissue specificity
Expressed in stems, shoots, leaves, flowers and siliques.
Gene expression databases
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Sequence similarities
Belongs to the major facilitator superfamily. Proton-dependent oligopeptide transporter (POT/PTR) (TC 2.A.17) family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length575
- Mass (Da)64,306
- Last updated2010-11-02 v1
- Checksum96C59544E10B30B8
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A1P8AZR9 | A0A1P8AZR9_ARATH | At2g37900 | 496 |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CP002685 EMBL· GenBank· DDBJ | AEC09463.1 EMBL· GenBank· DDBJ | Genomic DNA |