Nucleotide sequence of the alpha ribosomal protein operon of Escherichia coli.Bedwell D.M., Davis G.R., Gosink M., Post L.E., Nomura M., Kestler H., Zengel J.M., Lindahl L.View abstractCited forNUCLEOTIDE SEQUENCE [GENOMIC DNA]StrainK12CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNucleic Acids Res. 13:3891-3903 (1985)Cited in5
The complete genome sequence of Escherichia coli K-12.Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K.[...], Shao Y.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainK12 / MG1655 / ATCC 47076CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 277:1453-1462 (1997)Cited in99+4
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110.Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L.[...], Horiuchi T.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainK12 / W3110 / ATCC 27325 / DSM 5911CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCMol. Syst. Biol. 2:E1-E5 (2006)Cited in99+3
Primary structure of protein S13 from the small subunit of Escherichia coli ribosomes.Lindemann H., Wittmann-Liebold B.View abstractCited forPROTEIN SEQUENCE OF 2-118, SUBUNITStrainKCategoriesSequences, InteractionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCHoppe-Seyler's Z. Physiol. Chem. 358:843-863 (1977)Cited in1
DNA sequence of the promoter region for the alpha ribosomal protein operon in Escherichia coli.Post L.E., Arfsten A.E., Davis G.R., Nomura M.View abstractCited forNUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-36CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Biol. Chem. 255:4653-4659 (1980)Cited in3
Growth-rate-dependent regulation of ribosome synthesis in E. coli: expression of the lacZ and galK genes fused to ribosomal promoters.Miura A., Krueger J.H., Itoh S., de Boer H.A., Nomura M.View abstractCited forNUCLEOTIDE SEQUENCE [GENOMIC DNA] OF 1-36CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCCell 25:773-782 (1981)Cited in1
Identification of a cross-link in the Escherichia coli ribosomal protein pair S13-S19 at the amino acid level.Pohl T., Wittmann-Liebold B.View abstractCited forPROTEIN SEQUENCE OF 83-85, CROSS-LINKING TO S19, SUBUNITStrainK12 / A19CategoriesPTM / Processing, Sequences, InteractionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Biol. Chem. 263:4293-4301 (1988)Cited in2
A new system for naming ribosomal proteins.Ban N., Beckmann R., Cate J.H.D., Dinman J.D., Dragon F., Ellis S.R., Lafontaine D.L.J., Lindahl L., Liljas A.[...], Yusupov M.View abstractCited forNOMENCLATURECategoryNamesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCCurr. Opin. Struct. Biol. 24:165-169 (2014)Cited in99+
Antisuppression by a mutation in rpsM(S13) giving a shortened ribosomal protein S13.Faxen M., Walles-Granberg A., Isaksson L.A.View abstractCited forCHARACTERIZATION OF VARIANT RPSM413StrainK12CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCBiochim. Biophys. Acta 1218:27-34 (1994)Cited in1
The ribosomal neighbourhood of the central fold of tRNA: cross-links from position 47 of tRNA located at the A, P or E site.Osswald M., Doering T., Brimacombe R.View abstractCited forCROSS-LINKING TO THE TRNA CENTRAL FOLD, SUBUNITStrainMRE-600CategoriesPTM / Processing, InteractionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNucleic Acids Res. 23:4635-4641 (1995)Cited in9
A novel ribosome-associated protein is important for efficient translation in Escherichia coli.Bylund G.O., Persson B.C., Lundberg L.A., Wikstroem P.M.View abstractCited forABILITY OF VARIANTS PW118; PW097 AND PW095 TO PARTIALLY SUPPRESS A RIMM DELETIONStrainMW100CategorySequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Bacteriol. 179:4567-4574 (1997)Cited in2
Creating ribosomes with an all-RNA 30S subunit P site.Hoang L., Fredrick K., Noller H.F.View abstractCited forROLE IN P SITE TRNA-BINDING, MUTAGENESIS OF 83-LEU--LYS-118 AND 114-LYS--LYS-118StrainCSH142CategoriesFunction, Phenotypes & VariantsSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCProc. Natl. Acad. Sci. U.S.A. 101:12439-12443 (2004)Cited in2
Observation of Escherichia coli ribosomal proteins and their posttranslational modifications by mass spectrometry.Arnold R.J., Reilly J.P.View abstractCited forMASS SPECTROMETRY, SUBUNITStrainK12 / ATCC 25404 / DSM 5698 / NCIMB 11290CategoriesSequences, InteractionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCAnal. Biochem. 269:105-112 (1999)Cited in54
All-atom homology model of the Escherichia coli 30S ribosomal subunit.Tung C.-S., Joseph S., Sanbonmatsu K.Y.View abstractCited for3D-STRUCTURE MODELING, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNat. Struct. Biol. 9:750-755 (2002)Cited in19
Study of the structural dynamics of the E. coli 70S ribosome using real- space refinement.Gao H., Sengupta J., Valle M., Korostelev A., Eswar N., Stagg S.M., Van Roey P., Agrawal R.K., Harvey S.C.[...], Frank J.View abstractCited forSTRUCTURE BY ELECTRON MICROSCOPY (11.50 ANGSTROMS), SUBUNIT, INTERSUBUNIT BRIDGE FORMATIONStrainMRE-600CategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCCell 113:789-801 (2003)Cited in44
Structures of the bacterial ribosome at 3.5 A resolution.Schuwirth B.S., Borovinskaya M.A., Hau C.W., Zhang W., Vila-Sanjurjo A., Holton J.M., Cate J.H.D.View abstractCited forX-RAY CRYSTALLOGRAPHY (3.46 ANGSTROMS) OF 2 DIFFERENT RIBOSOME STRUCTURES INCLUDING THE INTERSUBUNIT BRIDGE B1B, SUBUNITStrainMRE-600CategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 310:827-834 (2005)Cited in50Mapped to9
Locking and unlocking of ribosomal motions.Valle M., Zavialov A., Sengupta J., Rawat U., Ehrenberg M., Frank J.View abstractCited for3D-STRUCTURE MODELING OF RIBOSOMAL COMPLEXES INCLUDING BRIDGE CHANGES UPON TRANSLOCATION, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCCell 114:123-134 (2003)Cited in5Mapped to3
Mechanistic insights into the alternative translation termination by ArfA and RF2.Ma C., Kurita D., Li N., Chen Y., Himeno H., Gao N.View abstractCited forSTRUCTURE BY ELECTRON MICROSCOPY (3.0 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH ARFA AND RF2, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNature 541:550-553 (2017)Cited in53
Structural basis for ArfA-RF2-mediated translation termination on mRNAs lacking stop codons.Huter P., Mueller C., Beckert B., Arenz S., Berninghausen O., Beckmann R., Wilson D.N.View abstractCited forSTRUCTURE BY ELECTRON MICROSCOPY (3.1 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH ARFA AND RF2, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNature 541:546-549 (2017)Cited in53
Translational termination without a stop codon.James N.R., Brown A., Gordiyenko Y., Ramakrishnan V.View abstractCited forSTRUCTURE BY ELECTRON MICROSCOPY (2.97 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH ARFA AND RF2, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCScience 354:1437-1440 (2016)Cited in54
Structural basis of co-translational quality control by ArfA and RF2 bound to ribosome.Zeng F., Chen Y., Remis J., Shekhar M., Phillips J.C., Tajkhorshid E., Jin H.View abstractCited forSTRUCTURE BY ELECTRON MICROSCOPY (3.52 ANGSTROMS) OF 70S RIBOSOME IN COMPLEX WITH ARFA AND RF2, SUBUNITCategoriesInteraction, StructureSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNature 541:554-557 (2017)Cited in54
Paenilamicins from the honey bee pathogen <i>Paenibacillus larvae</i> are context-specific translocation inhibitors of protein synthesis.Koller T.O., Berger M.J., Morici M., Paternoga H., Bulatov T., Di Stasi A., Dang T., Mainz A., Raulf K.[...], Wilson D.N.View abstractCategoryStructureSourcePDB: 8R6C, PDB: 8R8M, PDB: 9FBVPubMedEurope PMCbioRxiv 0:2024.05.21.595107-2024.05.21.595107 (2024)Mapped to49
Structural insights into the decoding capability of isoleucine tRNAs with lysidine and agmatidine.Akiyama N., Ishiguro K., Yokoyama T., Miyauchi K., Nagao A., Shirouzu M., Suzuki T.View abstractCategoryStructureSourcePDB: 8HSP, PDB: 8HTZ, PDB: 8HU1PubMedEurope PMCNat Struct Mol Biol 31:817-825 (2024)Mapped to49
The SecM arrest peptide traps a pre-peptide bond formation state of the ribosome.Gersteuer F., Morici M., Gabrielli S., Fujiwara K., Safdari H.A., Paternoga H., Bock L.V., Chiba S., Wilson D.N.View abstractCategoryStructureSourcePDB: 8QOAPubMedEurope PMCNat Commun 15:2431-2431 (2024)Mapped to50
RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity.Morici M., Gabrielli S., Fujiwara K., Paternoga H., Beckert B., Bock L.V., Chiba S., Wilson D.N.View abstractCategoryStructureSourcePDB: 8QBTPubMedEurope PMCNat Commun 15:2432-2432 (2024)Cited in3Mapped to83