P09877 · VG4_BPNF

Function

function

This protein is believed to be a positive regulator of late transcription. It may function as a sigma-like component of the host RNA polymerase. Binds to a region of the A3 promoter located between nucleotides -50 and -100 relative to the transcription start site, that presents a sequence-directed curvature. Full induction of this curvature is needed for the transcription activation process (By similarity).

Features

Showing features for dna binding.

1125102030405060708090100110120
TypeIDPosition(s)Description
DNA binding77-96H-T-H motif

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular ComponentDNA-directed RNA polymerase complex
Molecular FunctionDNA-directed 5'-3' RNA polymerase activity
Molecular Functionsigma factor activity

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Late genes activator
  • Alternative names
    • Early protein GP4
    • GPF

Gene names

    • Name
      4
    • Synonyms
      F

Organism names

Accessions

  • Primary accession
    P09877

Subcellular Location

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00001065591-125Late genes activator

Expression

Keywords

Structure

3D structure databases

Family & Domains

Sequence similarities

Belongs to the podoviruses GP4 family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    125
  • Mass (Da)
    15,019
  • Last updated
    1989-07-01 v1
  • Checksum
    DBC8AD3EC41A643D
MPRTARGIYHNLKESEYVVSNGDATFFFFSEMYQNKFLDGYQKHREEFNKKINRITDTPLNMDMLADITFYSNVEKRGFHAWLKGVNTTWQEIHVYALRTMTKPCTQNWSRIRKPKLVERRKSMV

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
M13664
EMBL· GenBank· DDBJ
AAA32195.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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