SEM1, a homologue of the split hand/split foot malformation candidate gene Dss1, regulates exocytosis and pseudohyphal differentiation in yeast.Jantti J., Lahdenranta J., Olkkonen V.M., Soderlund H., Keranen S.View abstractCited forNUCLEOTIDE SEQUENCE [MRNA]CategoriesSequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCProc. Natl. Acad. Sci. U.S.A. 96:909-914 (1999)Cited in1
No title available.DeHoratius C., Green M.R.Cited forNUCLEOTIDE SEQUENCE [GENOMIC DNA]StrainATCC 90840 / EAY235 / FY23CategoriesSequencesSourceUniProtKB reviewed (Swiss-Prot)Submission Submitted to EMBL/GenBank/DDBJ databases (MAY-1998)Cited in1
The nucleotide sequence of Saccharomyces cerevisiae chromosome IV.Jacq C., Alt-Moerbe J., Andre B., Arnold W., Bahr A., Ballesta J.P.G., Bargues M., Baron L., Becker A.[...], Zaccaria P.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainATCC 204508 / S288cCategoriesSequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNature 387:75-78 (1997)Cited in99+
The reference genome sequence of Saccharomyces cerevisiae: Then and now.Engel S.R., Dietrich F.S., Fisk D.G., Binkley G., Balakrishnan R., Costanzo M.C., Dwight S.S., Hitz B.C., Karra K.[...], Cherry J.M.View abstractCited forGENOME REANNOTATIONStrainATCC 204508 / S288cCategoriesSequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCG3 (Bethesda) 4:389-398 (2014)Cited in99+
Approaching a complete repository of sequence-verified protein-encoding clones for Saccharomyces cerevisiae.Hu Y., Rolfs A., Bhullar B., Murthy T.V.S., Zhu C., Berger M.F., Camargo A.A., Kelley F., McCarron S.[...], LaBaer J.View abstractCited forNUCLEOTIDE SEQUENCE [GENOMIC DNA]StrainATCC 204508 / S288cCategoriesSequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCGenome Res. 17:536-543 (2007)Cited in99+
Quantitative phosphoproteomics applied to the yeast pheromone signaling pathway.Gruhler A., Olsen J.V., Mohammed S., Mortensen P., Faergeman N.J., Mann M., Jensen O.N.View abstractCited forACETYLATION [LARGE SCALE ANALYSIS] AT SER-2, PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-12, CLEAVAGE OF INITIATOR METHIONINE [LARGE SCALE ANALYSIS], IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS]StrainYAL6BCategoriesPTM / Processing, SequencesSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCMol. Cell. Proteomics 4:310-327 (2005)Cited in99+
A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing.Wilmes G.M., Bergkessel M., Bandyopadhyay S., Shales M., Braberg H., Cagney G., Collins S.R., Whitworth G.B., Kress T.L.[...], Krogan N.J.View abstractCited forINTERACTION WITH CSN12 AND THP3CategoriesInteractionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCMol. Cell 32:735-746 (2008)Cited in3Mapped to4
Global analysis of protein expression in yeast.Ghaemmaghami S., Huh W.-K., Bower K., Howson R.W., Belle A., Dephoure N., O'Shea E.K., Weissman J.S.View abstractCited forLEVEL OF PROTEIN EXPRESSION [LARGE SCALE ANALYSIS]CategoriesExpressionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCNature 425:737-741 (2003)Cited in99+
Sem1 is a functional component of the nuclear pore complex-associated messenger RNA export machinery.Faza M.B., Kemmler S., Jimeno S., Gonzalez-Aguilera C., Aguilera A., Hurt E., Panse V.G.View abstractCited forDISRUPTION PHENOTYPE, FUNCTION, SUBUNIT, INTERACTION WITH CSN12 AND THP3CategoriesFunction, Interaction, Phenotypes & VariantsSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Cell Biol. 184:833-846 (2009)Cited in3Mapped to2
Sem1p is a novel subunit of the 26S proteasome from Saccharomyces cerevisiae.Sone T., Saeki Y., Toh-e A., Yokosawa H.View abstractCited forFUNCTIONCategoriesFunctionSourceUniProtKB reviewed (Swiss-Prot)PubMedEurope PMCJ. Biol. Chem. 279:28807-28816 (2004)Cited in2
Structural assembly of the nucleic-acid-binding Thp3-Csn12-Sem1 complex functioning in mRNA splicing.Kuang Z., Ke J., Hong J., Zhu Z., Niu L.View abstractCategoriesStructureSourcePDB: 7EWF, PDB: 7EWMPubMedEurope PMCNucleic Acids Res 50:8882-8897 (2022)Mapped to3
Allosteric control of Ubp6 and the proteasome via a bidirectional switch.Hung K.Y.S., Klumpe S., Eisele M.R., Elsasser S., Tian G., Sun S., Moroco J.A., Cheng T.C., Joshi T.[...], Finley D.View abstractCategoriesStructureSourcePDB: 7QO3, PDB: 7QO5, PDB: 7QO6PubMedEurope PMCNat Commun 13:838-838 (2022)Cited in1Mapped to35
Structural Snapshots of 26S Proteasome Reveal Tetraubiquitin-Induced Conformations.Ding Z., Xu C., Sahu I., Wang Y., Fu Z., Huang M., Wong C.C.L., Glickman M.H., Cong Y.View abstractCategoriesStructureSourcePDB: 6J2C, PDB: 6J2N, PDB: 6J2Q, PDB: 6J2X, PDB: 6J30PubMedEurope PMCMol Cell 73:1150-1161.e6 (2019)Mapped to33
Expanded Coverage of the 26S Proteasome Conformational Landscape Reveals Mechanisms of Peptidase Gating.Eisele M.R., Reed R.G., Rudack T., Schweitzer A., Beck F., Nagy I., Pfeifer G., Plitzko J.M., Baumeister W.[...], Sakata E.View abstractCategoriesStructureSourcePDB: 6FVT, PDB: 6FVU, PDB: 6FVV, PDB: 6FVW, PDB: 6FVX, PDB: 6FVYPubMedEurope PMCCell Rep 24:1301-1315.e5 (2018)Mapped to33
Structure of the Sac3 RNA-binding M-region in the Saccharomyces cerevisiae TREX-2 complex.Gordon J.M.B., Aibara S., Stewart M.View abstractCategoriesStructureSourcePDB: 5UBPPubMedEurope PMCNucleic Acids Res 45:5577-5585 (2017)Cited in1Mapped to2
Structural insights into the functional cycle of the ATPase module of the 26S proteasome.Wehmer M., Rudack T., Beck F., Aufderheide A., Pfeifer G., Plitzko J.M., Forster F., Schulten K., Baumeister W., Sakata E.View abstractCategoriesStructureSourcePDB: 5MPB, PDB: 5MPC, PDB: 5MPD, PDB: 5MPEPubMedEurope PMCProc Natl Acad Sci U S A 114:1305-1310 (2017)Mapped to34
High-resolution cryo-EM structure of the proteasome in complex with ADP- AlFx.Ding Z., Fu Z., Xu C., Wang Y., Wang Y., Li J., Kong L., Chen J., Li N.[...], Cong Y.View abstractCategoriesStructureSourcePDB: 5WVI, PDB: 5WVKPubMedEurope PMCCell Res 27:373-385 (2017)Mapped to33
A bacterial genetic selection system for ubiquitylation cascade discovery.Levin-Kravets O., Tanner N., Shohat N., Attali I., Keren-Kaplan T., Shusterman A., Artzi S., Varvak A., Reshef Y.[...], Prag G.View abstractAnnotationPrimary LiteratureCategoriesPTM / ProcessingSourceSGD: S000007235PubMedEurope PMCNat Methods 13:945-952 (2016)Cited in1Mapped to5
Functional Metabolomics Describes the Yeast Biosynthetic Regulome.Mulleder M., Calvani E., Alam M.T., Wang R.K., Eckerstorfer F., Zelezniak A., Ralser M.View abstractAnnotationPrimary LiteratureCategoriesFunctionSourceSGD: S000007235PubMedEurope PMCCell 167:553-565.e12 (2016)Mapped to99+
Proteasome dynamics between proliferation and quiescence stages of Saccharomyces cerevisiae.Yedidi R.S., Fatehi A.K., Enenkel C.View abstractAnnotationReviewsSourceSGD: S000007235PubMedEurope PMCCrit Rev Biochem Mol Biol 51:497-512 (2016)Mapped to50
The Sac3 TPR-like region in the Saccharomyces cerevisiae TREX-2 complex is more extensive but independent of the CID region.Aibara S., Bai X.C., Stewart M.View abstractCategoriesStructureSourcePDB: 5G5P, PDB: 5L3TPubMedEurope PMCJ Struct Biol 195:316-324 (2016)Mapped to5
Structure of an endogenous yeast 26S proteasome reveals two major conformational states.Luan B., Huang X., Wu J., Mei Z., Wang Y., Xue X., Yan C., Wang J., Finley D.J.[...], Wang F.View abstractAnnotationPrimary LiteratureCategoriesStructureSourcePDB: 3JCO, PDB: 3JCP, SGD: S000007235PubMedEurope PMCProc Natl Acad Sci U S A 113:2642-2647 (2016)Mapped to33
Atomic structure of the 26S proteasome lid reveals the mechanism of deubiquitinase inhibition.Dambacher C.M., Worden E.J., Herzik M.A., Martin A., Lander G.C.View abstractCategoriesStructureSourcePDB: 3JCKPubMedEurope PMCElife 5:e13027-e13027 (2016)Mapped to9
Proteasome Impairment Induces Recovery of Mitochondrial Membrane Potential and an Alternative Pathway of Mitochondrial Fusion.Shirozu R., Yashiroda H., Murata S.View abstractAnnotationPrimary LiteratureCategoriesFunctionSourceSGD: S000007235PubMedEurope PMCMol Cell Biol 36:347-362 (2016)Mapped to12
1.25 A resolution structure of an RNA 20-mer that binds to the TREX2 complex.Valkov E., Stewart M.View abstractAnnotationPrimary LiteratureCategoriesStructureSourceSGD: S000007235PubMedEurope PMCActa Crystallogr F Struct Biol Commun 71:1318-1321 (2015)Mapped to5