O93287 · O93287_AMBME

Function

function

Sequence-specific transcription factor which is part of a developmental regulatory system that provides cells with specific positional identities on the anterior-posterior axis.

Features

Showing features for dna binding.

127620406080100120140160180200220240260
TypeIDPosition(s)Description
DNA binding204-263Homeobox

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleoplasm
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Homeobox transcription factor

Gene names

    • Name
      Hoxd-11

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Amphibia > Batrachia > Caudata > Salamandroidea > Ambystomatidae > Ambystoma

Accessions

  • Primary accession
    O93287

Subcellular Location

Keywords

  • Cellular component

Structure

Family & Domains

Features

Showing features for compositional bias, region, domain.

TypeIDPosition(s)Description
Compositional bias142-170Polar residues
Region142-208Disordered
Compositional bias179-205Polar residues
Domain202-262Homeobox

Sequence similarities

Belongs to the Abd-B homeobox family.

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    276
  • Mass (Da)
    31,673
  • Last updated
    1998-11-01 v1
  • Checksum
    5EC5DE03AF5B210F
MTEFDGCSNSASNMYLPGCAYYVSPSDFSSKTSFLSQSSSCPMTFPYSSNIPHVQPVREMAFREYGLERSKWQYRGSYSSYYPSEEVVHRDYIQPGNRRTDVLFKSDPLCSHHGTPSASSNLYSTVGRNGVLPQEFDQFYEASQGNSYPPENGVPTEKTDSKNQPPKTASPSPEKKVGAEGSTDSSSGEVTADKSNSSATPQRSRKKRCPYTKYQIRELEREFFFNVYINKEKRLQLSRMLNLSDRQVKIWFQNRRMREKKLNRDRLQYFTGNPLF

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias142-170Polar residues
Compositional bias179-205Polar residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AF031481
EMBL· GenBank· DDBJ
AAC34744.1
EMBL· GenBank· DDBJ
mRNA

Similar Proteins

Disclaimer

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