O81801 · O81801_ARATH
- ProteinAt4g35700
- GeneDAZ3
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids275 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Molecular Function | DNA-binding transcription factor activity | |
Biological Process | pollen sperm cell differentiation | |
Biological Process | regulation of DNA-templated transcription |
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionO81801
Proteomes
Organism-specific databases
Genome annotation databases
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Interaction
Binary interactions
Type | Entry 1 | Entry 2 | Number of experiments | Intact | |
---|---|---|---|---|---|
BINARY | O81801 | MBD1 Q5XEN5 | 3 | EBI-4447483, EBI-4445335 | |
BINARY | O81801 | MBD2 Q8LA53 | 5 | EBI-4447483, EBI-4425826 | |
BINARY | O81801 | MBD4 Q9LYB9 | 5 | EBI-4447483, EBI-15191715 |
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for region, domain, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 1-22 | Disordered | ||||
Sequence: MSNPEKSKIAEEENENFDESDY | ||||||
Domain | 144-164 | C2H2-type | ||||
Sequence: CNVCGKGFASWKAVFGHLRQH | ||||||
Compositional bias | 243-267 | Basic and acidic residues | ||||
Sequence: EEDKVIGVGSKRKFDLNRSPPPDGD | ||||||
Region | 243-275 | Disordered | ||||
Sequence: EEDKVIGVGSKRKFDLNRSPPPDGDEENDDKVE |
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length275
- Mass (Da)28,688
- Last updated1998-11-01 v1
- Checksum5F575471CE1755D2
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 243-267 | Basic and acidic residues | ||||
Sequence: EEDKVIGVGSKRKFDLNRSPPPDGD |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
DQ446897 EMBL· GenBank· DDBJ | ABE66113.1 EMBL· GenBank· DDBJ | mRNA | ||
BT029346 EMBL· GenBank· DDBJ | ABK32160.1 EMBL· GenBank· DDBJ | mRNA | ||
CP002687 EMBL· GenBank· DDBJ | AEE86550.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AL031135 EMBL· GenBank· DDBJ | CAA20040.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AL161587 EMBL· GenBank· DDBJ | CAB80286.1 EMBL· GenBank· DDBJ | Genomic DNA |