O60229 · KALRN_HUMAN
- ProteinKalirin
- GeneKALRN
- StatusUniProtKB reviewed (Swiss-Prot)
- Organism
- Amino acids2986 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Function
function
Miscellaneous
Catalytic activity
- ATP + L-seryl-[protein] = ADP + H+ + O-phospho-L-seryl-[protein]
Cofactor
Features
Showing features for binding site, active site.
GO annotations
Aspect | Term | |
---|---|---|
Cellular Component | actin cytoskeleton | |
Cellular Component | cytoplasm | |
Cellular Component | cytosol | |
Cellular Component | extracellular exosome | |
Cellular Component | extrinsic component of membrane | |
Cellular Component | nucleoplasm | |
Cellular Component | postsynaptic density | |
Molecular Function | ATP binding | |
Molecular Function | guanyl-nucleotide exchange factor activity | |
Molecular Function | metal ion binding | |
Molecular Function | protein serine kinase activity | |
Molecular Function | protein serine/threonine kinase activity | |
Biological Process | axon guidance | |
Biological Process | ephrin receptor signaling pathway | |
Biological Process | intracellular signal transduction | |
Biological Process | nervous system development | |
Biological Process | protein phosphorylation | |
Biological Process | regulation of small GTPase mediated signal transduction | |
Biological Process | signal transduction | |
Biological Process | vesicle-mediated transport |
Keywords
- Molecular function
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameKalirin
- EC number
- Alternative names
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Primates > Haplorrhini > Catarrhini > Hominidae > Homo
Accessions
- Primary accessionO60229
- Secondary accessions
Proteomes
Organism-specific databases
Subcellular Location
Keywords
- Cellular component
Disease & Variants
Features
Showing features for natural variant, mutagenesis.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Natural variant | VAR_041898 | 196 | ||||
Sequence: S → L | ||||||
Natural variant | VAR_035976 | 213 | in a colorectal cancer sample; somatic mutation; dbSNP:rs1187034389 | |||
Sequence: R → W | ||||||
Natural variant | VAR_020192 | 1326 | in dbSNP:rs2289838 | |||
Sequence: E → D | ||||||
Natural variant | VAR_035625 | 1897 | in a breast cancer sample; somatic mutation | |||
Sequence: S → C | ||||||
Natural variant | VAR_057190 | 1930 | in dbSNP:rs35298864 | |||
Sequence: R → M | ||||||
Mutagenesis | 2713 | Loss of autophosphorylation. | ||||
Sequence: K → A |
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 3,341 variants from UniProt as well as other sources including ClinVar and dbSNP.
Organism-specific databases
Miscellaneous
Genetic variation databases
PTM/Processing
Features
Showing features for chain, modified residue (large scale data), modified residue, disulfide bond.
Type | ID | Position(s) | Source | Description | |||
---|---|---|---|---|---|---|---|
Chain | PRO_0000080955 | 1-2986 | UniProt | Kalirin | |||
Sequence: MTDRFWDQWYLWYLRLLRLLDRGSFRNDGLKASDVLPILKEKVAFVSGGRDKRGGPILTFPARSNHDRIRQEDLRKLVTYLASVPSEDVCKRGFTVIIDMRGSKWDLIKPLLKTLQEAFPAEIHVALIIKPDNFWQKQKTNFGSSKFIFETSMVSVEGLTKLVDPSQLTEEFDGSLDYNHEEWIELRLSLEEFFNSAVHLLSRLEDLQEMLARKEFPVDVEGSRRLIDEHTQLKKKVLKAPVEELDREGQRLLQCIRCSDGFSGRNCIPGSADFQSLVPKITSLLDKLHSTRQHLHQMWHVRKLKLDQCFQLRLFEQDAEKMFDWISHNKELFLQSHTEIGVSYQYALDLQTQHNHFAMNSMNAYVNINRIMSVASRLSEAGHYASQQIKQISTQLDQEWKSFAAALDERSTILAMSAVFHQKAEQFLSGVDAWCKMCSEGGLPSEMQDLELAIHHHQTLYEQVTQAYTEVSQDGKALLDVLQRPLSPGNSESLTATANYSKAVHQVLDVVHEVLHHQRRLESIWQHRKVRLHQRLQLCVFQQDVQQVLDWIENHGEAFLSKHTGVGKSLHRARALQKRHDDFEEVAQNTYTNADKLLEAAEQLAQTGECDPEEIYKAARHLEVRIQDFVRRVEQRKLLLDMSVSFHTHTKELWTWMEDLQKEMLEDVCADSVDAVQELIKQFQQQQTATLDATLNVIKEGEDLIQQLRSAPPSLGEPSEARDSAVSNNKTPHSSSISHIESVLQQLDDAQVQMEELFHERKIKLDIFLQLRIFEQYTIEVTAELDAWNEDLLRQMNDFNTEDLTLAEQRLQRHTERKLAMNNMTFEVIQQGQDLHQYITEVQASGIELICEKDIDLAAQVQELLEFLHEKQHELELNAEQTHKRLEQCLQLRHLQAEVKQVLGWIRNGESMLNASLVNASSLSEAEQLQREHEQFQLAIESLFHATSLQKTHQSALQVQQKAEVLLQAGHYDADAIRECAEKVALHWQQLMLKMEDRLKLVNASVAFYKTSEQVCSVLESLEQEYRRDEDWCGGRDKLGPAAEIDHVIPLISKHLEQKEAFLKACTLARRNAEVFLKYIHRNNVSMPSVASHTRGPEQQVKAILSELLQRENRVLHFWTLKKRRLDQCQQYVVFERSAKQALDWIQETGEFYLSTHTSTGETTEETQELLKEYGEFRVPAKQTKEKVKLLIQLADSFVEKGHIHATEIRKWVTTVDKHYRDFSLRMGKYRYSLEKALGVNTEDNKDLELDIIPASLSDREVKLRDANHEVNEEKRKSARKKEFIMAELLQTEKAYVRDLHECLETYLWEMTSGVEEIPPGILNKEHIIFGNIQEIYDFHNNIFLKELEKYEQLPEDVGHCFVTWADKFQMYVTYCKNKPDSNQLILEHAGTFFDEIQQRHGLANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGELKDGLEVMLSVPKKANDAMHVSMLEGFDENLDVQGELILQDAFQVWDPKSLIRKGRERHLFLFEISLVFSKEIKDSSGHTKYVYKNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQERIIHLKGALKEPLQLPKTPAKQRNNSKRDGVEDIDSQGDGSSQPDTISIASRTSQNTVDSDKLSGGCELTVVLQDFSAGHSSELTIQVGQTVELLERPSERPGWCLVRTTERSPPLEGLVPSSALCISHSRSSVEMDCFFPLVKDAYSHSSSENGGKSESVANLQAQPSLNSIHSSPGPKRSTNTLKKWLTSPVRRLNSGKADGNIKKQKKVRDGRKSFDLGSPKPGDETTPQGDSADEKSKKGWGEDEPDEESHTPLPPPMKIFDNDPTQDEMSSSLLAARQASTEVPTAADLVNAIEKLVKNKLSLEGSSYRGSLKDPAGCLNEGMAPPTPPKNPEEEQKAKALRGRMFVLNELVQTEKDYVKDLGIVVEGFMKRIEEKGVPEDMRGKDKIVFGNIHQIYDWHKDFFLAELEKCIQEQDRLAQLFIKHERKLHIYVWYCQNKPRSEYIVAEYDAYFEEVKQEINQRLTLSDFLIKPIQRITKYQLLLKDFLRYSEKAGLECSDIEKAVELMCLVPKRCNDMMNLGRLQGFEGTLTAQGKLLQQDTFYVIELDAGMQSRTKERRVFLFEQIVIFSELLRKGSLTPGYMFKRSIKMNYLVLEENVDNDPCKFALMNRETSERVVLQAANADIQQAWVQDINQVLETQRDFLNALQSPIEYQRKERSTAVMRSQPARLPQASPRPYSSVPAGSEKPPKGSSYNPPLPPLKISTSNGSPGFEYHQPGDKFEASKQNDLGGCNGTSSMAVIKDYYALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAPLTKATAAESSDGSIKKSCSWHTLRMRKRAEVENTGKNEATGPRKPKDILGNKVSVKETNSSEESECDDLDPNTSMEILNPNFIQEVAPEFLVPLVDVTCLLGDTVILQCKVCGRPKPTITWKGPDQNILDTDNSSATYTVSSCDSGEITLKICNLMPQDSGIYTCIATNDHGTTSTSATVKVQGVPAAPNRPIAQERSCTSVILRWLPPSSTGNCTISGYTVEYREEGSQIWQQSVASTLDTYLVIEDLSPGCPYQFRVSASNPWGISLPSEPSEFVRLPEYDAAADGATISWKENFDSAYTELNEIGRGRFSIVKKCIHKATRKDVAVKFVSKKMKKKEQAAHEAALLQHLQHPQYITLHDTYESPTSYILILELMDDGRLLDYLMNHDELMEEKVAFYIRDIMEALQYLHNCRVAHLDIKPENLLIDLRIPVPRVKLIDLEDAVQISGHFHIHHLLGNPEFAAPEVIQGIPVSLGTDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFPHEYFCGVSNAARDFINVILQEDFRRRPTAATCLQHPWLQPHNGSYSKIPLDTSRLACFIERRKHQNDVRPIPNVKSYIVNRVNQGT | |||||||
Modified residue (large scale data) | 672 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1714 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1741 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue | 1750 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1750 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue | 1753 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1753 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1756 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1757 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1772 | PRIDE | Phosphothreonine | ||||
Sequence: T | |||||||
Modified residue (large scale data) | 1773 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue | 1799 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1799 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1804 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue | 1812 | UniProt | Phosphothreonine | ||||
Sequence: T | |||||||
Modified residue | 1817 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1817 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1837 | PRIDE | Phosphothreonine | ||||
Sequence: T | |||||||
Modified residue (large scale data) | 1866 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 1897 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue | 1913 | UniProt | Phosphothreonine | ||||
Sequence: T | |||||||
Modified residue (large scale data) | 1913 | PRIDE | Phosphothreonine | ||||
Sequence: T | |||||||
Modified residue (large scale data) | 2164 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2237 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue | 2262 | UniProt | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2262 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2392 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2393 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 2396 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Disulfide bond | 2492↔2548 | UniProt | |||||
Sequence: CKVCGRPKPTITWKGPDQNILDTDNSSATYTVSSCDSGEITLKICNLMPQDSGIYTC |
Post-translational modification
Keywords
- PTM
Proteomic databases
PTM databases
Interaction
Subunit
Interacts with FASLG
Binary interactions
Type | Entry 1 | Entry 2 | Number of experiments | Intact | |
---|---|---|---|---|---|
XENO | O60229 | rep PRO_0000449631 P0DTD1 | 3 | EBI-949233, EBI-25475920 | |
XENO | O60229 | rep PRO_0000449633 P0DTD1 | 3 | EBI-949233, EBI-25492395 | |
BINARY | O60229-2 | SNCAIP Q9Y6H5-1 | 3 | EBI-9075360, EBI-9075374 |
Protein-protein interaction databases
Miscellaneous
Family & Domains
Features
Showing features for domain, repeat, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 35-180 | CRAL-TRIO | ||||
Sequence: VLPILKEKVAFVSGGRDKRGGPILTFPARSNHDRIRQEDLRKLVTYLASVPSEDVCKRGFTVIIDMRGSKWDLIKPLLKTLQEAFPAEIHVALIIKPDNFWQKQKTNFGSSKFIFETSMVSVEGLTKLVDPSQLTEEFDGSLDYNH | ||||||
Repeat | 167-308 | Spectrin 1 | ||||
Sequence: QLTEEFDGSLDYNHEEWIELRLSLEEFFNSAVHLLSRLEDLQEMLARKEFPVDVEGSRRLIDEHTQLKKKVLKAPVEELDREGQRLLQCIRCSDGFSGRNCIPGSADFQSLVPKITSLLDKLHSTRQHLHQMWHVRKLKLDQ | ||||||
Repeat | 310-417 | Spectrin 2 | ||||
Sequence: FQLRLFEQDAEKMFDWISHNKELFLQSHTEIGVSYQYALDLQTQHNHFAMNSMNAYVNINRIMSVASRLSEAGHYASQQIKQISTQLDQEWKSFAAALDERSTILAMS | ||||||
Repeat | 418-535 | Spectrin 3 | ||||
Sequence: AVFHQKAEQFLSGVDAWCKMCSEGGLPSEMQDLELAIHHHQTLYEQVTQAYTEVSQDGKALLDVLQRPLSPGNSESLTATANYSKAVHQVLDVVHEVLHHQRRLESIWQHRKVRLHQR | ||||||
Repeat | 536-639 | Spectrin 4 | ||||
Sequence: LQLCVFQQDVQQVLDWIENHGEAFLSKHTGVGKSLHRARALQKRHDDFEEVAQNTYTNADKLLEAAEQLAQTGECDPEEIYKAARHLEVRIQDFVRRVEQRKLL | ||||||
Repeat | 640-770 | Spectrin 5 | ||||
Sequence: LDMSVSFHTHTKELWTWMEDLQKEMLEDVCADSVDAVQELIKQFQQQQTATLDATLNVIKEGEDLIQQLRSAPPSLGEPSEARDSAVSNNKTPHSSSISHIESVLQQLDDAQVQMEELFHERKIKLDIFLQ | ||||||
Region | 710-735 | Disordered | ||||
Sequence: SAPPSLGEPSEARDSAVSNNKTPHSS | ||||||
Compositional bias | 721-735 | Polar residues | ||||
Sequence: ARDSAVSNNKTPHSS | ||||||
Repeat | 771-888 | Spectrin 6 | ||||
Sequence: LRIFEQYTIEVTAELDAWNEDLLRQMNDFNTEDLTLAEQRLQRHTERKLAMNNMTFEVIQQGQDLHQYITEVQASGIELICEKDIDLAAQVQELLEFLHEKQHELELNAEQTHKRLEQ | ||||||
Repeat | 889-1004 | Spectrin 7 | ||||
Sequence: CLQLRHLQAEVKQVLGWIRNGESMLNASLVNASSLSEAEQLQREHEQFQLAIESLFHATSLQKTHQSALQVQQKAEVLLQAGHYDADAIRECAEKVALHWQQLMLKMEDRLKLVNA | ||||||
Repeat | 1005-1128 | Spectrin 8 | ||||
Sequence: SVAFYKTSEQVCSVLESLEQEYRRDEDWCGGRDKLGPAAEIDHVIPLISKHLEQKEAFLKACTLARRNAEVFLKYIHRNNVSMPSVASHTRGPEQQVKAILSELLQRENRVLHFWTLKKRRLDQ | ||||||
Repeat | 1129-1234 | Spectrin 9 | ||||
Sequence: CQQYVVFERSAKQALDWIQETGEFYLSTHTSTGETTEETQELLKEYGEFRVPAKQTKEKVKLLIQLADSFVEKGHIHATEIRKWVTTVDKHYRDFSLRMGKYRYSL | ||||||
Domain | 1281-1456 | DH 1 | ||||
Sequence: KKEFIMAELLQTEKAYVRDLHECLETYLWEMTSGVEEIPPGILNKEHIIFGNIQEIYDFHNNIFLKELEKYEQLPEDVGHCFVTWADKFQMYVTYCKNKPDSNQLILEHAGTFFDEIQQRHGLANSISSYLIKPVQRITKYQLLLKELLTCCEEGKGELKDGLEVMLSVPKKANDA | ||||||
Domain | 1468-1580 | PH 1 | ||||
Sequence: NLDVQGELILQDAFQVWDPKSLIRKGRERHLFLFEISLVFSKEIKDSSGHTKYVYKNKLLTSELGVTEHVEGDPCKFALWSGRTPSSDNKTVLKASNIETKQEWIKNIREVIQ | ||||||
Region | 1594-1642 | Disordered | ||||
Sequence: LQLPKTPAKQRNNSKRDGVEDIDSQGDGSSQPDTISIASRTSQNTVDSD | ||||||
Compositional bias | 1617-1642 | Polar residues | ||||
Sequence: SQGDGSSQPDTISIASRTSQNTVDSD | ||||||
Domain | 1646-1711 | SH3 1 | ||||
Sequence: GGCELTVVLQDFSAGHSSELTIQVGQTVELLERPSERPGWCLVRTTERSPPLEGLVPSSALCISHS | ||||||
Compositional bias | 1750-1773 | Polar residues | ||||
Sequence: SLNSIHSSPGPKRSTNTLKKWLTS | ||||||
Region | 1750-1857 | Disordered | ||||
Sequence: SLNSIHSSPGPKRSTNTLKKWLTSPVRRLNSGKADGNIKKQKKVRDGRKSFDLGSPKPGDETTPQGDSADEKSKKGWGEDEPDEESHTPLPPPMKIFDNDPTQDEMSS | ||||||
Compositional bias | 1782-1804 | Basic and acidic residues | ||||
Sequence: KADGNIKKQKKVRDGRKSFDLGS | ||||||
Compositional bias | 1813-1837 | Basic and acidic residues | ||||
Sequence: PQGDSADEKSKKGWGEDEPDEESHT | ||||||
Domain | 1929-2104 | DH 2 | ||||
Sequence: GRMFVLNELVQTEKDYVKDLGIVVEGFMKRIEEKGVPEDMRGKDKIVFGNIHQIYDWHKDFFLAELEKCIQEQDRLAQLFIKHERKLHIYVWYCQNKPRSEYIVAEYDAYFEEVKQEINQRLTLSDFLIKPIQRITKYQLLLKDFLRYSEKAGLECSDIEKAVELMCLVPKRCNDM | ||||||
Domain | 2116-2226 | PH 2 | ||||
Sequence: TLTAQGKLLQQDTFYVIELDAGMQSRTKERRVFLFEQIVIFSELLRKGSLTPGYMFKRSIKMNYLVLEENVDNDPCKFALMNRETSERVVLQAANADIQQAWVQDINQVLE | ||||||
Region | 2244-2310 | Disordered | ||||
Sequence: KERSTAVMRSQPARLPQASPRPYSSVPAGSEKPPKGSSYNPPLPPLKISTSNGSPGFEYHQPGDKFE | ||||||
Compositional bias | 2286-2300 | Polar residues | ||||
Sequence: LPPLKISTSNGSPGF | ||||||
Domain | 2321-2386 | SH3 2 | ||||
Sequence: NGTSSMAVIKDYYALKENEICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAPLTK | ||||||
Compositional bias | 2412-2434 | Basic and acidic residues | ||||
Sequence: AEVENTGKNEATGPRKPKDILGN | ||||||
Region | 2412-2454 | Disordered | ||||
Sequence: AEVENTGKNEATGPRKPKDILGNKVSVKETNSSEESECDDLDP | ||||||
Domain | 2471-2564 | Ig-like C2-type | ||||
Sequence: PEFLVPLVDVTCLLGDTVILQCKVCGRPKPTITWKGPDQNILDTDNSSATYTVSSCDSGEITLKICNLMPQDSGIYTCIATNDHGTTSTSATVK | ||||||
Domain | 2571-2665 | Fibronectin type-III | ||||
Sequence: APNRPIAQERSCTSVILRWLPPSSTGNCTISGYTVEYREEGSQIWQQSVASTLDTYLVIEDLSPGCPYQFRVSASNPWGISLPSEPSEFVRLPEY | ||||||
Domain | 2684-2938 | Protein kinase | ||||
Sequence: YTELNEIGRGRFSIVKKCIHKATRKDVAVKFVSKKMKKKEQAAHEAALLQHLQHPQYITLHDTYESPTSYILILELMDDGRLLDYLMNHDELMEEKVAFYIRDIMEALQYLHNCRVAHLDIKPENLLIDLRIPVPRVKLIDLEDAVQISGHFHIHHLLGNPEFAAPEVIQGIPVSLGTDIWSIGVLTYVMLSGVSPFLDESKEETCINVCRVDFSFPHEYFCGVSNAARDFINVILQEDFRRRPTAATCLQHPWL |
Domain
Sequence similarities
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence & Isoforms
- Sequence statusComplete
This entry describes 5 isoforms produced by Alternative splicing.
O60229-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name1
- Length2,986
- Mass (Da)340,261
- Last updated2019-07-31 v3
- ChecksumEA7B559A9E4AFFA0
O60229-2
- Name2
- Differences from canonical
- 1644-1663: LSGGCELTVVLQDFSAGHSS → DGNLVPRWHLGPGDPFSTYV
- 1664-2986: Missing
O60229-4
- Name4
- SynonymsDUET, TRAD
- Differences from canonical
- 1-1697: Missing
- 1698-1725: EGLVPSSALCISHSRSSVEMDCFFPLVK → MKGGDRAYTRGPSLGWLFAKCCCCFPCR
O60229-5
- Name5
- Differences from canonical
- 1-1627: Missing
- 1628-1643: ISIASRTSQNTVDSDK → MLKWISWRQSKANKAQ
- 1857-1888: Missing
- 2314-2314: Missing
- 2399-2986: Missing
O60229-6
- Name6
- Differences from canonical
- 1-1697: Missing
- 1698-1725: EGLVPSSALCISHSRSSVEMDCFFPLVK → MKGGDRAYTRGPSLGWLFAKCCCCFPCR
- 1857-1888: Missing
Computationally mapped potential isoform sequences
There are 25 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
C9IZQ6 | C9IZQ6_HUMAN | KALRN | 1654 | ||
C9J1B4 | C9J1B4_HUMAN | KALRN | 194 | ||
A0A804HI83 | A0A804HI83_HUMAN | KALRN | 1092 | ||
A0A804HI91 | A0A804HI91_HUMAN | KALRN | 1022 | ||
A0A804HHT5 | A0A804HHT5_HUMAN | KALRN | 44 | ||
A0A804HI42 | A0A804HI42_HUMAN | KALRN | 103 | ||
A0A804HJ49 | A0A804HJ49_HUMAN | KALRN | 1041 | ||
A0A804HIN3 | A0A804HIN3_HUMAN | KALRN | 1000 | ||
A0A804HIP9 | A0A804HIP9_HUMAN | KALRN | 1005 | ||
A0A804HIY9 | A0A804HIY9_HUMAN | KALRN | 890 | ||
A0A804HJ74 | A0A804HJ74_HUMAN | KALRN | 189 | ||
A0A804HII1 | A0A804HII1_HUMAN | KALRN | 1198 | ||
A0A804HIK8 | A0A804HIK8_HUMAN | KALRN | 939 | ||
A0A0D9SGH1 | A0A0D9SGH1_HUMAN | KALRN | 53 | ||
A0A804HLI0 | A0A804HLI0_HUMAN | KALRN | 2986 | ||
H7BXZ5 | H7BXZ5_HUMAN | KALRN | 2955 | ||
A0A804HLC8 | A0A804HLC8_HUMAN | KALRN | 98 | ||
A0A804HLF3 | A0A804HLF3_HUMAN | KALRN | 1059 | ||
A0A804HJX0 | A0A804HJX0_HUMAN | KALRN | 545 | ||
A0A804HJZ3 | A0A804HJZ3_HUMAN | KALRN | 45 | ||
A0A804HJC5 | A0A804HJC5_HUMAN | KALRN | 1008 | ||
A0A804HKU9 | A0A804HKU9_HUMAN | KALRN | 145 | ||
A0A804HKT9 | A0A804HKT9_HUMAN | KALRN | 1613 | ||
A0A804HKJ7 | A0A804HKJ7_HUMAN | KALRN | 709 | ||
H7C1X7 | H7C1X7_HUMAN | KALRN | 215 |
Sequence caution
Features
Showing features for alternative sequence, compositional bias, sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Alternative sequence | VSP_028904 | 1-1627 | in isoform 5 | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_028903 | 1-1697 | in isoform 4 and isoform 6 | |||
Sequence: Missing | ||||||
Compositional bias | 721-735 | Polar residues | ||||
Sequence: ARDSAVSNNKTPHSS | ||||||
Compositional bias | 1617-1642 | Polar residues | ||||
Sequence: SQGDGSSQPDTISIASRTSQNTVDSD | ||||||
Alternative sequence | VSP_028909 | 1628-1643 | in isoform 5 | |||
Sequence: ISIASRTSQNTVDSDK → MLKWISWRQSKANKAQ | ||||||
Alternative sequence | VSP_028910 | 1644-1663 | in isoform 2 | |||
Sequence: LSGGCELTVVLQDFSAGHSS → DGNLVPRWHLGPGDPFSTYV | ||||||
Alternative sequence | VSP_028911 | 1664-2986 | in isoform 2 | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_028912 | 1698-1725 | in isoform 4 and isoform 6 | |||
Sequence: EGLVPSSALCISHSRSSVEMDCFFPLVK → MKGGDRAYTRGPSLGWLFAKCCCCFPCR | ||||||
Compositional bias | 1750-1773 | Polar residues | ||||
Sequence: SLNSIHSSPGPKRSTNTLKKWLTS | ||||||
Compositional bias | 1782-1804 | Basic and acidic residues | ||||
Sequence: KADGNIKKQKKVRDGRKSFDLGS | ||||||
Compositional bias | 1813-1837 | Basic and acidic residues | ||||
Sequence: PQGDSADEKSKKGWGEDEPDEESHT | ||||||
Alternative sequence | VSP_028913 | 1857-1888 | in isoform 5 and isoform 6 | |||
Sequence: Missing | ||||||
Compositional bias | 2286-2300 | Polar residues | ||||
Sequence: LPPLKISTSNGSPGF | ||||||
Alternative sequence | VSP_028914 | 2314 | in isoform 5 | |||
Sequence: Missing | ||||||
Alternative sequence | VSP_028915 | 2399-2986 | in isoform 5 | |||
Sequence: Missing | ||||||
Compositional bias | 2412-2434 | Basic and acidic residues | ||||
Sequence: AEVENTGKNEATGPRKPKDILGN | ||||||
Sequence conflict | 2459 | in Ref. 2; BAA76314 | ||||
Sequence: E → G |
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
U94190 EMBL· GenBank· DDBJ | AAC15791.1 EMBL· GenBank· DDBJ | mRNA | ||
AB011422 EMBL· GenBank· DDBJ | BAA76314.1 EMBL· GenBank· DDBJ | mRNA | ||
AK125979 EMBL· GenBank· DDBJ | BAC86373.1 EMBL· GenBank· DDBJ | mRNA | ||
AK131379 EMBL· GenBank· DDBJ | BAD18530.1 EMBL· GenBank· DDBJ | mRNA | Sequence problems. | |
AC022336 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC069233 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC080008 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC112129 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AC117401 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
KF457679 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
CH471052 EMBL· GenBank· DDBJ | EAW79410.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
BC026865 EMBL· GenBank· DDBJ | AAH26865.1 EMBL· GenBank· DDBJ | mRNA | ||
BC058015 EMBL· GenBank· DDBJ | AAH58015.1 EMBL· GenBank· DDBJ | mRNA | Sequence problems. | |
AL137629 EMBL· GenBank· DDBJ | CAB70850.1 EMBL· GenBank· DDBJ | mRNA |