O49195 · VSP1_ARATH
- ProteinVegetative storage protein 1
- GeneVSP1
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids270 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score3/5
Function
function
May function as somatic storage protein during early seedling development.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | plant-type vacuole | |
Molecular Function | acid phosphatase activity | |
Molecular Function | nutrient reservoir activity | |
Biological Process | defense response | |
Biological Process | response to jasmonic acid |
Keywords
- Molecular function
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameVegetative storage protein 1
Gene names
- Community suggested namesVSP1
Organism names
- Strains
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionO49195
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
PTM/Processing
Features
Showing features for signal, chain, glycosylation.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Signal | 1-17 | |||||
Sequence: MKILSLSLLLLLAATVS | ||||||
Chain | PRO_0000023987 | 18-270 | Vegetative storage protein 1 | |||
Sequence: HVQSSASVPGLIELLESNTIFGNEAELLEKEGLSINYPNCRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNGSKLTQVVYKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPGRVFKLPNPLYYVPS | ||||||
Glycosylation | 115 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 215 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N |
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Tissue specificity
Expressed in leaves and in gynoecia, especially in styles, the basal and distal ends of ovaries and in siliques.
Induction
Expression is enhanced during wounding.
Gene expression databases
Structure
Sequence
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
This entry describes 1 isoforms produced by Alternative splicing. A number of isoforms are produced. According to EST sequences.
O49195-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name1
- Length270
- Mass (Da)30,262
- Last updated2007-05-29 v2
- ChecksumABD0AE4387E02BE5
Computationally mapped potential isoform sequences
There is 1 potential isoform mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
B3H5J6 | B3H5J6_ARATH | VSP1 | 225 |
Sequence caution
Features
Showing features for sequence conflict.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Sequence conflict | 1-4 | in Ref. 2 | ||||
Sequence: MKIL → MV | ||||||
Sequence conflict | 13 | in Ref. 3; BAA22095 | ||||
Sequence: A → V | ||||||
Sequence conflict | 64 | in Ref. 2; CAA56036 | ||||
Sequence: V → F | ||||||
Sequence conflict | 69 | in Ref. 2; CAA56036 | ||||
Sequence: I → M | ||||||
Sequence conflict | 118 | in Ref. 1, 2 and 8 | ||||
Sequence: V → I | ||||||
Sequence conflict | 148 | in Ref. 2; CAA56036 | ||||
Sequence: P → A | ||||||
Sequence conflict | 156 | in Ref. 2; CAA56036 | ||||
Sequence: E → V | ||||||
Sequence conflict | 169 | in Ref. 3; BAA22095 | ||||
Sequence: H → Y | ||||||
Sequence conflict | 194-196 | in Ref. 1, 2 and 8 | ||||
Sequence: VTV → ITI | ||||||
Sequence conflict | 210 | in Ref. 2; CAA56036 | ||||
Sequence: L → V |
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AF043343 EMBL· GenBank· DDBJ | AAB97863.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
X79490 EMBL· GenBank· DDBJ | CAA56036.1 EMBL· GenBank· DDBJ | mRNA | ||
D85190 EMBL· GenBank· DDBJ | BAA22095.1 EMBL· GenBank· DDBJ | mRNA | ||
AB006777 EMBL· GenBank· DDBJ | BAA33446.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AL392145 EMBL· GenBank· DDBJ | CAC08252.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002688 EMBL· GenBank· DDBJ | AED93360.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AF386930 EMBL· GenBank· DDBJ | AAK62375.1 EMBL· GenBank· DDBJ | mRNA | ||
AY044328 EMBL· GenBank· DDBJ | AAK73269.1 EMBL· GenBank· DDBJ | mRNA | ||
AY072506 EMBL· GenBank· DDBJ | AAL66921.1 EMBL· GenBank· DDBJ | mRNA | ||
AY087185 EMBL· GenBank· DDBJ | AAM64741.1 EMBL· GenBank· DDBJ | mRNA | ||
Z18377 EMBL· GenBank· DDBJ | CAA79173.1 EMBL· GenBank· DDBJ | mRNA | Frameshift |