O45460 · NHR54_CAEEL

  • Protein
    Nuclear hormone receptor family member nhr-54
  • Gene
    nhr-54
  • Status
    UniProtKB reviewed (Swiss-Prot)
  • Amino acids
  • Protein existence
    Evidence at transcript level
  • Annotation score
    3/5

Function

function

Orphan nuclear receptor.

Features

Showing features for dna binding.

142250100150200250300350400
TypeIDPosition(s)Description
DNA binding14-92Nuclear receptor

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Molecular Functionzinc ion binding

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Nuclear hormone receptor family member nhr-54

Gene names

    • Name
      nhr-54
    • ORF names
      F36D3.2

Organism names

  • Taxonomic identifier
  • Strain
    • Bristol N2
  • Taxonomic lineage
    Eukaryota > Metazoa > Ecdysozoa > Nematoda > Chromadorea > Rhabditida > Rhabditina > Rhabditomorpha > Rhabditoidea > Rhabditidae > Peloderinae > Caenorhabditis

Accessions

  • Primary accession
    O45460
  • Secondary accessions
    • Q9GTF9

Proteomes

Organism-specific databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00000537881-422Nuclear hormone receptor family member nhr-54

Proteomic databases

Expression

Gene expression databases

    • WBGene00003644Expressed in pharyngeal muscle cell (C elegans) and 3 other cell types or tissues

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for zinc finger, domain.

TypeIDPosition(s)Description
Zinc finger17-37NR C4-type
Zinc finger53-80NR C4-type
Domain161-422NR LBD

Sequence similarities

Belongs to the nuclear hormone receptor family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    422
  • Mass (Da)
    49,473
  • Last updated
    1998-06-01 v1
  • Checksum
    3B652E904C86C9AC
MEIPSTSSEMTYFSVKCAICYKAGHGQHFGVETCRACAAFFRRTVVLNRKYKCTRKSGKCKIGSDETKDVMCKFCRFKKCIDLGMTTENVRTDQVINLNVEPSTSQSLVRLEMTSLQPETDDSNRVQYQIIHPRTRGPAILIDVNAIIKRSKTILETHFFPDDDVIVELNPLEKMTFCLRKLRSKQSWNPNFFTKINFLDLFEFWESQMEDTATWLMYSGEFRKLPNHEKIAIFKIVWAVWRRLERYTMTAQVFGQKCYDEQILLHSHQDAARFTDYDVDYSYITDQGFEKINGLFGGKMIQYFDIIVKPYLELELSDTEIAYILCQIVWNYAGRRLQGQTQAAGERFLEVISNNLHKYYEDKSGNRKRAEDKQNYVARLAKMMQIVNQMLNAQLKMENTMDVAMLFNTFNIVFTEPEFFRV

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
Z81531
EMBL· GenBank· DDBJ
CAB04316.1
EMBL· GenBank· DDBJ
Genomic DNA
AF273800
EMBL· GenBank· DDBJ
AAG15149.1
EMBL· GenBank· DDBJ
mRNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
We'd like to inform you that we have updated our Privacy Notice to comply with Europe’s new General Data Protection Regulation (GDPR) that applies since 25 May 2018.
FeedbackHelp