O04350 · TBCA_ARATH
- ProteinTubulin-folding cofactor A
- GeneTFCA
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids113 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score5/5
Variants
Variant ID(s) | Position(s) | Change | Description | Clinical significance | Provenance | ||
---|---|---|---|---|---|---|---|
tmp_2_12959935_G_A | 42 | G>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 2:g.12959935G>A Codon: GGT/AGT Consequence type: missense Cytogenetic band: Genomic location: 2:g.12959935G>A Locations: - p.Gly42Ser (EnsemblPlants:AT2G30410.2) - c.124G>A (EnsemblPlants:AT2G30410.2) - p.Gly42Ser (EnsemblPlants:AT2G30410.3) - c.124G>A (EnsemblPlants:AT2G30410.3) - p.Gly42Ser (EnsemblPlants:AT2G30410.1) - c.124G>A (EnsemblPlants:AT2G30410.1) Source type: large scale study Cross-references: | |||||||
tmp_2_12959948_A_G | 46 | Y>C | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 2:g.12959948A>G Codon: TAC/TGC Consequence type: missense Cytogenetic band: Genomic location: 2:g.12959948A>G Locations: - p.Tyr46Cys (EnsemblPlants:AT2G30410.2) - c.137A>G (EnsemblPlants:AT2G30410.2) - p.Tyr46Cys (EnsemblPlants:AT2G30410.3) - c.137A>G (EnsemblPlants:AT2G30410.3) - p.Tyr46Cys (EnsemblPlants:AT2G30410.1) - c.137A>G (EnsemblPlants:AT2G30410.1) Source type: large scale study Cross-references: | |||||||
tmp_2_12960465_G_T | 85 | E>D | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.13) Somatic: No Accession: 2:g.12960465G>T Codon: GAG/GAT Consequence type: missense Cytogenetic band: Genomic location: 2:g.12960465G>T Locations: - p.Glu85Asp (EnsemblPlants:AT2G30410.2) - c.255G>T (EnsemblPlants:AT2G30410.2) - p.Glu85Asp (EnsemblPlants:AT2G30410.3) - c.255G>T (EnsemblPlants:AT2G30410.3) - p.Glu85Asp (EnsemblPlants:AT2G30410.1) - c.255G>T (EnsemblPlants:AT2G30410.1) Source type: large scale study Cross-references: | |||||||
ENSVATH00254797 | 101 | V>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 2:g.12960512T>C Codon: GTC/GCC Consequence type: missense Cytogenetic band: Genomic location: 2:g.12960512T>C Locations: - p.Val101Ala (EnsemblPlants:AT2G30410.2) - c.302T>C (EnsemblPlants:AT2G30410.2) - p.Val101Ala (EnsemblPlants:AT2G30410.3) - c.302T>C (EnsemblPlants:AT2G30410.3) - p.Val101Ala (EnsemblPlants:AT2G30410.1) - c.302T>C (EnsemblPlants:AT2G30410.1) Source type: large scale study Cross-references: | |||||||
tmp_2_12960514_G_T | 102 | A>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.4) Somatic: No Accession: 2:g.12960514G>T Codon: GCG/TCG Consequence type: missense Cytogenetic band: Genomic location: 2:g.12960514G>T Locations: - p.Ala102Ser (EnsemblPlants:AT2G30410.2) - c.304G>T (EnsemblPlants:AT2G30410.2) - p.Ala102Ser (EnsemblPlants:AT2G30410.3) - c.304G>T (EnsemblPlants:AT2G30410.3) - p.Ala102Ser (EnsemblPlants:AT2G30410.1) - c.304G>T (EnsemblPlants:AT2G30410.1) Source type: large scale study Cross-references: |