M9PFF9 · M9PFF9_DROME
- ProteinTrailer hitch, isoform D
- Genetral
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids646 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score4/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | cytosol | |
Cellular Component | fusome | |
Cellular Component | P granule | |
Cellular Component | P-body | |
Cellular Component | spliceosomal complex | |
Molecular Function | mRNA binding | |
Biological Process | actin cytoskeleton organization | |
Biological Process | microtubule cytoskeleton organization | |
Biological Process | P-body assembly | |
Biological Process | stress granule assembly |
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Metazoa > Ecdysozoa > Arthropoda > Hexapoda > Insecta > Pterygota > Neoptera > Endopterygota > Diptera > Brachycera > Muscomorpha > Ephydroidea > Drosophilidae > Drosophila > Sophophora
Accessions
- Primary accessionM9PFF9
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias, motif.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 1-81 | Sm | ||||
Sequence: MSGGLPELGSKISLISKADIRYEGRLYTVDPQECTIALSSVRSFGTEDRDTQFQIAPQSQIYDYILFRGSDIKDIRVVNNH | ||||||
Region | 95-156 | Disordered | ||||
Sequence: QLQNGPPQMPQHFPMPSGMSGPPQQQQVPSQQPPQMPSGGGSGGAGGAGAPGGGGPGYGNGN | ||||||
Compositional bias | 112-132 | Polar residues | ||||
Sequence: GMSGPPQQQQVPSQQPPQMPS | ||||||
Region | 177-206 | Disordered | ||||
Sequence: LAPGSGAPGSGPFMHIGGNQQQPKPQQQKQ | ||||||
Compositional bias | 191-206 | Polar residues | ||||
Sequence: HIGGNQQQPKPQQQKQ | ||||||
Compositional bias | 233-250 | Polar residues | ||||
Sequence: ELTQQQQLHQQQNAGQGG | ||||||
Region | 233-404 | Disordered | ||||
Sequence: ELTQQQQLHQQQNAGQGGNGRDAGHKRQNHQQQQNQQHQQRGGPSHNNMQQQQQRGGGSGTDFYNQQRDRRDSGRQMDNNYSNNYNNNNNNQRNRGGGNGMQQQQRGGNGGSGGGGGNGGGNNPAWNMHRGNQNSNNMMNMRNRGMGSRGPMRPNQGYRPQSANNQNKPRNK | ||||||
Compositional bias | 261-296 | Polar residues | ||||
Sequence: NHQQQQNQQHQQRGGPSHNNMQQQQQRGGGSGTDFY | ||||||
Compositional bias | 309-343 | Polar residues | ||||
Sequence: MDNNYSNNYNNNNNNQRNRGGGNGMQQQQRGGNGG | ||||||
Compositional bias | 357-375 | Polar residues | ||||
Sequence: AWNMHRGNQNSNNMMNMRN | ||||||
Compositional bias | 387-402 | Polar residues | ||||
Sequence: NQGYRPQSANNQNKPR | ||||||
Domain | 399-435 | DFDF | ||||
Sequence: NKPRNKIKFEGDFDFEQANNKFEELRSQLAKLKVAED | ||||||
Region | 434-481 | Disordered | ||||
Sequence: EDGAPKPATNATAATATATNEQLNGETDKKDDSGNETGAGEHEPEEDD | ||||||
Compositional bias | 457-481 | Basic and acidic residues | ||||
Sequence: NGETDKKDDSGNETGAGEHEPEEDD | ||||||
Domain | 484-500 | FFD box profile | ||||
Sequence: VCYDKTKSFFDNISCEA | ||||||
Motif | 484-500 | FFD box | ||||
Sequence: VCYDKTKSFFDNISCEA | ||||||
Compositional bias | 502-518 | Basic and acidic residues | ||||
Sequence: QDRSKNKKNDWRQERKL | ||||||
Region | 502-536 | Disordered | ||||
Sequence: QDRSKNKKNDWRQERKLNTETFGVSSTRRGSYRGR | ||||||
Domain | 507-527 | TFG box profile | ||||
Sequence: NKKNDWRQERKLNTETFGVSS | ||||||
Motif | 507-527 | TFG box | ||||
Sequence: NKKNDWRQERKLNTETFGVSS | ||||||
Compositional bias | 519-536 | Polar residues | ||||
Sequence: NTETFGVSSTRRGSYRGR | ||||||
Region | 566-646 | Disordered | ||||
Sequence: GGGGGNFRNRSNNRNNGGGRGGNGMPNITNGNTAAALKAANNAAGHGSNATDSSAPNATTATTKSTSLLPEQTQQVAAVSQ | ||||||
Compositional bias | 571-602 | Polar residues | ||||
Sequence: NFRNRSNNRNNGGGRGGNGMPNITNGNTAAAL | ||||||
Compositional bias | 609-646 | Polar residues | ||||
Sequence: AGHGSNATDSSAPNATTATTKSTSLLPEQTQQVAAVSQ |
Sequence similarities
Belongs to the LSM14 family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length646
- Mass (Da)68,717
- Last updated2013-06-26 v1
- Checksum5B2D8167FF663334
Computationally mapped potential isoform sequences
There are 7 potential isoforms mapped to this entry
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 112-132 | Polar residues | ||||
Sequence: GMSGPPQQQQVPSQQPPQMPS | ||||||
Compositional bias | 191-206 | Polar residues | ||||
Sequence: HIGGNQQQPKPQQQKQ | ||||||
Compositional bias | 233-250 | Polar residues | ||||
Sequence: ELTQQQQLHQQQNAGQGG | ||||||
Compositional bias | 261-296 | Polar residues | ||||
Sequence: NHQQQQNQQHQQRGGPSHNNMQQQQQRGGGSGTDFY | ||||||
Compositional bias | 309-343 | Polar residues | ||||
Sequence: MDNNYSNNYNNNNNNQRNRGGGNGMQQQQRGGNGG | ||||||
Compositional bias | 357-375 | Polar residues | ||||
Sequence: AWNMHRGNQNSNNMMNMRN | ||||||
Compositional bias | 387-402 | Polar residues | ||||
Sequence: NQGYRPQSANNQNKPR | ||||||
Compositional bias | 457-481 | Basic and acidic residues | ||||
Sequence: NGETDKKDDSGNETGAGEHEPEEDD | ||||||
Compositional bias | 502-518 | Basic and acidic residues | ||||
Sequence: QDRSKNKKNDWRQERKL | ||||||
Compositional bias | 519-536 | Polar residues | ||||
Sequence: NTETFGVSSTRRGSYRGR | ||||||
Compositional bias | 571-602 | Polar residues | ||||
Sequence: NFRNRSNNRNNGGGRGGNGMPNITNGNTAAAL | ||||||
Compositional bias | 609-646 | Polar residues | ||||
Sequence: AGHGSNATDSSAPNATTATTKSTSLLPEQTQQVAAVSQ |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AE014296 EMBL· GenBank· DDBJ | AGB94464.1 EMBL· GenBank· DDBJ | Genomic DNA |