M9PFF9 · M9PFF9_DROME

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytosol
Cellular Componentfusome
Cellular ComponentP granule
Cellular ComponentP-body
Cellular Componentspliceosomal complex
Molecular FunctionmRNA binding
Biological Processactin cytoskeleton organization
Biological Processmicrotubule cytoskeleton organization
Biological ProcessP-body assembly
Biological Processstress granule assembly

Names & Taxonomy

Protein names

  • Submitted names
    • Trailer hitch, isoform D

Gene names

    • Name
      tral
    • Synonyms
      anon-EST:Posey139
      , anon-WO0172774.89
      , anon-WO02059370.24
      , BEST:GH08269
      , Dmel\CG10686
      , DmLSm15
      , LSm15
      , Lsm15
      , p67
      , p70
      , Scd6p
      , TRAL
      , Tral
    • ORF names
      CG10686
      , Dmel_CG10686

Organism names

  • Taxonomic identifier
  • Strain
    • Berkeley
  • Taxonomic lineage
    Eukaryota > Metazoa > Ecdysozoa > Arthropoda > Hexapoda > Insecta > Pterygota > Neoptera > Endopterygota > Diptera > Brachycera > Muscomorpha > Ephydroidea > Drosophilidae > Drosophila > Sophophora

Accessions

  • Primary accession
    M9PFF9

Proteomes

Organism-specific databases

Expression

Gene expression databases

Structure

Family & Domains

Features

Showing features for domain, region, compositional bias, motif.

TypeIDPosition(s)Description
Domain1-81Sm
Region95-156Disordered
Compositional bias112-132Polar residues
Region177-206Disordered
Compositional bias191-206Polar residues
Compositional bias233-250Polar residues
Region233-404Disordered
Compositional bias261-296Polar residues
Compositional bias309-343Polar residues
Compositional bias357-375Polar residues
Compositional bias387-402Polar residues
Domain399-435DFDF
Region434-481Disordered
Compositional bias457-481Basic and acidic residues
Domain484-500FFD box profile
Motif484-500FFD box
Compositional bias502-518Basic and acidic residues
Region502-536Disordered
Domain507-527TFG box profile
Motif507-527TFG box
Compositional bias519-536Polar residues
Region566-646Disordered
Compositional bias571-602Polar residues
Compositional bias609-646Polar residues

Sequence similarities

Belongs to the LSM14 family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    646
  • Mass (Da)
    68,717
  • Last updated
    2013-06-26 v1
  • Checksum
    5B2D8167FF663334
MSGGLPELGSKISLISKADIRYEGRLYTVDPQECTIALSSVRSFGTEDRDTQFQIAPQSQIYDYILFRGSDIKDIRVVNNHTLPHHNDPAIMQAQLQNGPPQMPQHFPMPSGMSGPPQQQQVPSQQPPQMPSGGGSGGAGGAGAPGGGGPGYGNGNPFGNLGGPNLANMVGNAGGSLAPGSGAPGSGPFMHIGGNQQQPKPQQQKQPISVLDMLAGASRSTTPISLIVSPTAELTQQQQLHQQQNAGQGGNGRDAGHKRQNHQQQQNQQHQQRGGPSHNNMQQQQQRGGGSGTDFYNQQRDRRDSGRQMDNNYSNNYNNNNNNQRNRGGGNGMQQQQRGGNGGSGGGGGNGGGNNPAWNMHRGNQNSNNMMNMRNRGMGSRGPMRPNQGYRPQSANNQNKPRNKIKFEGDFDFEQANNKFEELRSQLAKLKVAEDGAPKPATNATAATATATNEQLNGETDKKDDSGNETGAGEHEPEEDDVAVCYDKTKSFFDNISCEAAQDRSKNKKNDWRQERKLNTETFGVSSTRRGSYRGRNQYYNNNGNGGINSGYGGAPGYNRNNYRMGGGGGNFRNRSNNRNNGGGRGGNGMPNITNGNTAAALKAANNAAGHGSNATDSSAPNATTATTKSTSLLPEQTQQVAAVSQ

Computationally mapped potential isoform sequences

There are 7 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
M9PF20M9PF20_DROMEtral657
M9PCB7M9PCB7_DROMEtral643
M9PF14M9PF14_DROMEtral656
M9PFG3M9PFG3_DROMEtral647
M9PFB2M9PFB2_DROMEtral642
M9PI44M9PI44_DROMEtral653
Q9VTZ0Q9VTZ0_DROMEtral652

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias112-132Polar residues
Compositional bias191-206Polar residues
Compositional bias233-250Polar residues
Compositional bias261-296Polar residues
Compositional bias309-343Polar residues
Compositional bias357-375Polar residues
Compositional bias387-402Polar residues
Compositional bias457-481Basic and acidic residues
Compositional bias502-518Basic and acidic residues
Compositional bias519-536Polar residues
Compositional bias571-602Polar residues
Compositional bias609-646Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AE014296
EMBL· GenBank· DDBJ
AGB94464.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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