The genome sequence of Drosophila melanogaster.Adams M.D., Celniker S.E., Holt R.A., Evans C.A., Gocayne J.D., Amanatides P.G., Scherer S.E., Li P.W., Hoskins R.A.[...], Venter J.C.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCScience 287:2185-2195 (2000)Cited in99+99+Mapped to9
Finishing a whole-genome shotgun: release 3 of the Drosophila melanogaster euchromatic genome sequence.Celniker S.E., Wheeler D.A., Kronmiller B., Carlson J.W., Halpern A., Patel S., Adams M., Champe M., Dugan S.P.[...], Rubin G.M.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol. 3:RESEARCH0079-RESEARCH0079 (2002)Cited in299+Mapped to12
Annotation of the Drosophila melanogaster euchromatic genome: a systematic review.Misra S., Crosby M.A., Mungall C.J., Matthews B.B., Campbell K.S., Hradecky P., Huang Y., Kaminker J.S., Millburn G.H.[...], Lewis S.E.View abstractCited forGENOME REANNOTATIONStrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol. 3:RESEARCH0083.1-RESEARCH0083.22 (2002)Cited in99+99+Mapped to25
The transposable elements of the Drosophila melanogaster euchromatin: a genomics perspective.Kaminker J.S., Bergman C.M., Kronmiller B., Carlson J.W., Svirskas R., Patel S., Frise E., Wheeler D.A., Lewis S.E.[...], Celniker S.E.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol. 3:RESEARCH0084.1-RESEARCH0084.20 (2002)Cited in399+
Heterochromatic sequences in a Drosophila whole-genome shotgun assembly.Hoskins R.A., Smith C.D., Carlson J.W., Carvalho A.B., Halpern A., Kaminker J.S., Kennedy C., Mungall C.J., Sullivan B.A.[...], Karpen G.H.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCGenome Biol 3:RESEARCH0085-RESEARCH0085 (2002)Cited in99+Mapped to8
Combined evidence annotation of transposable elements in genome sequences.Quesneville H., Bergman C.M., Andrieu O., Autard D., Nouaud D., Ashburner M., Anxolabehere D.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCPLoS Comput Biol 1:166-175 (2005)Cited in99+
The Release 5.1 annotation of Drosophila melanogaster heterochromatin.Smith C.D., Shu S., Mungall C.J., Karpen G.H.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCScience 316:1586-1591 (2007)Cited in99+Mapped to2
Sequence finishing and mapping of Drosophila melanogaster heterochromatin.Hoskins R.A., Carlson J.W., Kennedy C., Acevedo D., Evans-Holm M., Frise E., Wan K.H., Park S., Mendez-Lago M.[...], Celniker S.E.View abstractCited forNUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA]StrainBerkeleyCategorySequencesSourceUniProtKB unreviewed (TrEMBL)PubMedEurope PMCScience 316:1625-1628 (2007)Cited in199+
Alternative splicing of pre-mRNA: developmental consequences and mechanisms of regulation.Lopez A.J.View abstractCategoriesFunction, SequencesSourceFlyBase: FBgn0017457PubMedEurope PMCAnnu Rev Genet 32:279-305 (1998)Mapped to25
RNA binding activity of heterodimeric splicing factor U2AF: at least one RS domain is required for high-affinity binding.Rudner D.Z., Breger K.S., Kanaar R., Adams M.D., Rio D.C.View abstractCategoryInteractionSourceFlyBase: FBgn0017457PubMedEurope PMCMol Cell Biol 18:4004-4011 (1998)Mapped to6
Molecular genetic analysis of the heterodimeric splicing factor U2AF: the RS domain on either the large or small Drosophila subunit is dispensable in vivo.Rudner D.Z., Breger K.S., Rio D.C.View abstractCategoryInteractionSourceFlyBase: FBgn0017457PubMedEurope PMCGenes Dev 12:1010-1021 (1998)Mapped to10
Interaction between subunits of heterodimeric splicing factor U2AF is essential in vivo.Rudner D.Z., Kanaar R., Breger K.S., Rio D.C.View abstractCategoryInteractionSourceFlyBase: FBgn0017457PubMedEurope PMCMol Cell Biol 18:1765-1773 (1998)Mapped to7
Mutations in the small subunit of the Drosophila U2AF splicing factor cause lethality and developmental defects.Rudner D.Z., Kanaar R., Breger K.S., Rio D.C.View abstractCategorySequencesSourceFlyBase: FBgn0017457PubMedEurope PMCProc. Natl. Acad. Sci. U.S.A. 93:10333-10337 (1996)Cited in1Mapped to16
Co-transcriptional splicing facilitates transcription of gigantic genes.Fingerhut J.M., Lannes R., Whitfield T.W., Thiru P., Yamashita Y.M.View abstractSourceFlyBase: FBgn0017457PubMedEurope PMCPLoS Genet 20:e1011241-e1011241 (2024)Mapped to18
piRNA-guided intron removal from pre-mRNAs regulates density-dependent reproductive strategy.He J., Zhu Y.N., Wang B., Yang P., Guo W., Liang B., Jiang F., Wang H., Wei Y., Kang L.View abstractSourceFlyBase: FBgn0017457PubMedEurope PMCCell Rep 39:110593-110593 (2022)Mapped to19
A Candidate RNAi Screen Reveals Diverse RNA-Binding Protein Phenotypes in <i>Drosophila</i> Flight Muscle.Kao S.Y., Nikonova E., Chaabane S., Sabani A., Martitz A., Wittner A., Heemken J., Straub T., Spletter M.L.View abstractSourceFlyBase: FBgn0017457PubMedEurope PMCCells 10:2505-2505 (2021)Mapped to99+
Tumour-host interactions through the lens of Drosophila.Bilder D., Ong K., Hsi T.C., Adiga K., Kim J.View abstractSourceFlyBase: FBgn0017457PubMedEurope PMCNat Rev Cancer 21:687-700 (2021)Mapped to99+
Cross-species identification of PIP5K1-, splicing- and ubiquitin-related pathways as potential targets for RB1-deficient cells.Parkhitko A.A., Singh A., Hsieh S., Hu Y., Binari R., Lord C.J., Hannenhalli S., Ryan C.J., Perrimon N.View abstractSourceFlyBase: FBgn0017457PubMedEurope PMCPLoS Genet 17:e1009354-e1009354 (2021)Mapped to99+
CRISPR-based modular assembly of a UAS-cDNA/ORF plasmid library for more than 5500 <i>Drosophila</i> genes conserved in humans.Wei P., Xue W., Zhao Y., Ning G., Wang J.View abstractSourceFlyBase: FBgn0017457PubMedEurope PMCGenome Res 30:95-106 (2020)Mapped to99+
Large-scale RNAi screen identified Dhpr as a regulator of mitochondrial morphology and tissue homeostasis.Zhou J., Xu L., Duan X., Liu W., Zhao X., Wang X., Shang W., Fang X., Yang H.[...], Tong C.View abstractSourceFlyBase: FBgn0017457PubMedEurope PMCSci Adv 5:eaax0365-eaax0365 (2019)Mapped to99+
SOD1 activity threshold and TOR signalling modulate VAP(P58S) aggregation via reactive oxygen species-induced proteasomal degradation in a <i>Drosophila</i> model of amyotrophic lateral sclerosis.Chaplot K., Pimpale L., Ramalingam B., Deivasigamani S., Kamat S.S., Ratnaparkhi G.S.View abstractSourceFlyBase: FBgn0017457PubMedEurope PMCDis Model Mech 12:dmm033803-dmm033803 (2019)Mapped to99+
The Output of Protein-Coding Genes Shifts to Circular RNAs When the Pre- mRNA Processing Machinery Is Limiting.Liang D., Tatomer D.C., Luo Z., Wu H., Yang L., Chen L.L., Cherry S., Wilusz J.E.View abstractCategoryFunctionSourceFlyBase: FBgn0017457PubMedEurope PMCMol Cell 68:940-954.e3 (2017)Mapped to99+
Mapping Second Chromosome Mutations to Defined Genomic Regions in <i>Drosophila melanogaster</i>.Kahsai L., Cook K.R.View abstractCategorySequencesSourceFlyBase: FBgn0017457PubMedEurope PMCG3 (Bethesda) 8:9-16 (2018)Mapped to99+
Promiscuity in post-transcriptional control of gene expression: Drosophila sex-lethal and its regulatory partnerships.Moschall R., Gaik M., Medenbach J.View abstractCategoryNamesSourceFlyBase: FBgn0017457PubMedEurope PMCFEBS Lett 591:1471-1488 (2017)Mapped to68
Proteome-wide association studies identify biochemical modules associated with a wing-size phenotype in Drosophila melanogaster.Okada H., Ebhardt H.A., Vonesch S.C., Aebersold R., Hafen E.View abstractCategoryFunctionSourceFlyBase: FBgn0017457PubMedEurope PMCNat Commun 7:12649-12649 (2016)Mapped to99+