M0RBK6 · M0RBK6_RAT

  • Protein
    Spalt-like transcription factor 4
  • Gene
    Sall4
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentheterochromatin
Cellular Componentnucleus
Cellular Componentprotein-containing complex
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specific
Molecular Functionmetal ion binding
Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA binding
Biological Processembryonic limb morphogenesis
Biological Processheart development
Biological Processin utero embryonic development
Biological Processinner cell mass cell proliferation
Biological Processnegative regulation of transcription by RNA polymerase II
Biological Processneural tube closure
Biological Processneural tube development
Biological Processpositive regulation of transcription by RNA polymerase II
Biological Processregulation of transcription by RNA polymerase II
Biological Processsomatic stem cell population maintenance
Biological Processtissue development
Biological Processventricular septum development

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Spalt-like transcription factor 4

Gene names

    • Name
      Sall4
    • Synonyms
      LOC686412

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • Brown Norway
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Rattus

Accessions

  • Primary accession
    M0RBK6

Proteomes

Organism-specific databases

Subcellular Location

Keywords

  • Cellular component

Expression

Gene expression databases

Structure

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region1-45Disordered
Region67-95Disordered
Compositional bias74-95Polar residues
Domain91-118C2H2-type
Domain119-146C2H2-type

Sequence similarities

Belongs to the sal C2H2-type zinc-finger protein family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    282
  • Mass (Da)
    29,794
  • Last updated
    2013-04-03 v1
  • Checksum
    C166693F09AD1BA9
MSRRKQAKPQHINSEEGQGEQPLQQPSPGLAEAPAAEEPGRTSLPSTFIRAQPTFVKVEVPGSFVGPPSVPSGMTPLLASQQPPRRQAKQHSCTRCGKNFSSASALQIHERTHTGEKPFVCNICARAFTTKGNLKVHYMTHGTNNNSARRGRKLAIENTMAALGAEGKRAPEVFPKELLSPTVSVDPATWNQYTSVLNGGLAMKTNEISVIQSGGIPTLPVSLGASSVVSNPTLSKLDGSQTGGSGAMSGAMSGNLEKPGVPDGVAKHQFPHFLEENKIAVS

Computationally mapped potential isoform sequences

There is 1 potential isoform mapped to this entry

View all
EntryEntry nameGene nameLength
M0RDM1M0RDM1_RATSall41070

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias74-95Polar residues

Keywords

Genome annotation databases

Similar Proteins

Disclaimer

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