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L7C833 · L7C833_RHOBT

Function

function

DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

GO annotations

AspectTerm
Cellular ComponentDNA-directed RNA polymerase complex
Molecular FunctionDNA binding
Molecular FunctionDNA-directed 5'-3' RNA polymerase activity
Molecular Functionribonucleoside binding
Biological ProcessDNA-templated transcription

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    DNA-directed RNA polymerase subunit beta
  • EC number
  • Short names
    RNAP subunit beta
  • Alternative names
    • RNA polymerase subunit beta
    • Transcriptase subunit beta

Gene names

    • Name
      rpoB
    • ORF names
      RBSWK_06217

Organism names

  • Taxonomic identifier
  • Strain
    • SWK14
  • Taxonomic lineage
    Bacteria > Planctomycetota > Planctomycetia > Pirellulales > Pirellulaceae > Rhodopirellula

Accessions

  • Primary accession
    L7C833

Proteomes

Subcellular Location

Keywords

Interaction

Subunit

The RNAP catalytic core consists of 2 alpha, 1 beta, 1 beta' and 1 omega subunit. When a sigma factor is associated with the core the holoenzyme is formed, which can initiate transcription.

Structure

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain29-127RNA polymerase beta subunit protrusion
Domain129-448RNA polymerase beta subunit protrusion
Domain296-403RNA polymerase Rpb2
Domain462-530RNA polymerase Rpb2
Domain540-605DNA-directed RNA polymerase beta subunit external 1
Domain614-1160DNA-directed RNA polymerase subunit 2 hybrid-binding
Domain1162-1236RNA polymerase Rpb2

Sequence similarities

Belongs to the RNA polymerase beta chain family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,240
  • Mass (Da)
    138,007
  • Last updated
    2013-03-06 v1
  • MD5 Checksum
    9889C39FEF7682BBA0A9A14527314164
MATTTQRRLEPTSIRKFGTGLGQFDLPDLTALQTVSYAAFLQEDAASNARKDHGLESVLREIFPIASYDGNTTLEYLYYELGKPRYTIQECRQLRLTYGRPLRIWLRLNREEPIEEEVYLGDLPIMLGGGEFIINGAERVVVSQLHRSPGVDFVLEQDTTTDRKLPSCRVIPERGSWIEVNVTKKDALTVRIDQSGKFAATMLLRAMDPKYSTDADLLSAFYETGTIKVNGGKDATKIENKIAVDDVVYPSGHERAGEIIVEAGYKITTELSETICNAGVTSVEAMDLPKVPLIFNTLADDNTASHEEALLRIYQRLRPGNPPQLEKARTLFQEKFYDDNRYRLGKVGRFRLNRKLGLGVEETVMTLRPDDMIAAIRYLIDLFDADSGAEIDDIDHLGNRRLRTIDELASEELRKGFLKLRRTVQERMSVKDAQDMTPRSLINPKSVSAAIDFFFGRGELSQVVDQTNPLSQLAHERRLSALGPGGLNRKRAGFEVRDVHISHYGRICPIETPEGTNIGLISSLAIYAGVDDYGFLCTPFRKVIDGKISDETVWLRADEEGESYVAPADTEVKDGALVPGPNMIARFRSDFEIVMPEQVSFMDVAPAQMVGVSAGLIPFLEHDDANRALMGSNMQRQAVPLLVTEPPIVGTGMEREVAKNSAMVVRARRAGKVTYADATRIEIGSDHYPLKKYQGLNERTCQNQKPLITVGDKVEKGQIIADGAATQKGELALGRNVLVGFMSFDGFNYEDAIIISEELVRNDTYTSIHIEDFDVEIRETKLGREEFTRDIPNVSEKALRNLDDTGIVQTGTYVKPGDILVGKVSPKSKTELTPEEKLLHAIFGRAGEDVKNDSLEVPSGIEGIVIDTQKFSRRMSLGEDERKAFERELKQHETEGNEEIASTFESLIRDMEEASGVKLKDSTGTPLADGQDPKFVAERATSFRLELVLEQIEDEEKRKAAEKVHQTQWQNVEQAIDERDRKLNSMKRGDELRSGVLQMVKIYIATKRTISVGDKMAGRHGNKGVIAKILPIEDMPFLPDGTPIQIMLNPLGVPSRMNVGQILETHLGWAGAKLGFQALTPIFDGASESEINDCLAEAGLPAHGKIRLTDGRTGEPMEQETTVGYIYMLKLHHLVDDKVHARSTGPYSLITQQPLGGKARFGGQRFGEMEVWALEAYGAAYILQELLTVKSDDVEGRTKIYESMVKGENTLEAGTPASFDVLTNEIRGLALNMQLEKRPI

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AMWG01000179
EMBL· GenBank· DDBJ
ELP29832.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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