K7MW27 · K7MW27_SOYBN
- ProteinRNA helicase
- Gene100777064
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids829 (go to sequence)
- Protein existencePredicted
- Annotation score3/5
Function
Catalytic activity
- ATP + H2O = ADP + phosphate + H+
Cofactor
Protein has several cofactor binding sites:
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | mitochondrial degradosome | |
Cellular Component | mitochondrial nucleoid | |
Molecular Function | ATP binding | |
Molecular Function | hydrolase activity, acting on acid anhydrides | |
Molecular Function | RNA helicase activity | |
Biological Process | mitochondrial RNA 3'-end processing | |
Biological Process | RNA catabolic process |
Keywords
- Molecular function
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameRNA helicase
- EC number
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Fabales > Fabaceae > Papilionoideae > 50 kb inversion clade > NPAAA clade > indigoferoid/millettioid clade > Phaseoleae > Glycine > Glycine subgen. Soja
Accessions
- Primary accessionK7MW27
Proteomes
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Keywords
- Cellular component
PTM/Processing
Proteomic databases
Interaction
Subunit
Homodimer; in free form. Component of the mitochondrial degradosome (mtEXO) complex which is a heteropentamer containing 2 copies of SUPV3L1 and 3 copies of PNPT1.
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 55-88 | Disordered | ||||
Sequence: QSSRLSGERFRPTRPFSAAGDDGGTTEAPEGEFV | ||||||
Compositional bias | 132-146 | Polar residues | ||||
Sequence: VECSTSSSGGEGGGG | ||||||
Region | 132-154 | Disordered | ||||
Sequence: VECSTSSSGGEGGGGSDNNNELG | ||||||
Domain | 292-408 | Helicase ATP-binding | ||||
Sequence: FARAMKRKIIYHCGPTNSGKTYNALQRFMEAKSGIYCSPLRLLAMEVFDKVNAKGIYCSLLTGQEKKRVPFSNHVACTVEMASAQELYEVAVIDEIQMMADSNRGYAWTRALLGLKA | ||||||
Domain | 441-605 | Helicase C-terminal | ||||
Sequence: RFKPLVVEAKTLLGNFENIRSGDCVVAFSRREIFEVKLAIEKQTKHRCCVIYGALPPETRRQQASLFNDQSNEYDVLVASDAVGMGLNLNIRRVIFNSLAKYNGDKMVPIPASQVKQIAGRAGRRGCLYPDGLATTMHLDDLDYLIECLKQPFDDVKKVGLFPFY | ||||||
Region | 769-791 | Disordered | ||||
Sequence: IKGRPKTEKSEGGQLETRSEVEL |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length829
- Mass (Da)93,842
- Last updated2013-01-09 v1
- ChecksumF5023A21166EB5FA
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 132-146 | Polar residues | ||||
Sequence: VECSTSSSGGEGGGG |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CM000852 EMBL· GenBank· DDBJ | KRG93524.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CM000852 EMBL· GenBank· DDBJ | KRG93525.1 EMBL· GenBank· DDBJ | Genomic DNA |