K7FHL1 · K7FHL1_PELSI
- ProteinAlpha-1 type I collagen
- GeneCOL1A1
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1444 (go to sequence)
- Protein existencePredicted
- Annotation score5/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Keywords
- Ligand
Names & Taxonomy
Protein names
- Recommended nameAlpha-1 type I collagen
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Archelosauria > Testudinata > Testudines > Cryptodira > Trionychia > Trionychidae > Pelodiscus
Accessions
- Primary accessionK7FHL1
Proteomes
Subcellular Location
UniProt Annotation
GO Annotation
Keywords
- Cellular component
PTM/Processing
Features
Showing features for signal, chain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Signal | 1-24 | |||||
Sequence: MFSFVDSRLLLLIAATVLLTKGQG | ||||||
Chain | PRO_5003905227 | 25-1444 | Alpha-1 type I collagen | |||
Sequence: EDDVPSGNCIQDGLTYSDKDVWKPEPCQICVCDSGNILCDEVICEDTSDCPNAEIPFGECCPICPDSQASPSYPETTGVEGPRGDPGPRGDRGPPGPPGRDGIPGQPGLPGPPGPPGPPGLGGNFAPQLSYGYDEKSVGGLSMPGPMGPAGPRGLPGPPGSPGPQGFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGRPGERGAPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDTGPAGPKKRVPGSLGTGGPPGQIGPRGLPGERGRPGPSGPAGARGNDGAPGAAGPPGPTGPAGPPGFPGAVGAKGPVRPGGARGGAPSATGRGNPGSDGQPGAKGATGNPGSDGQPGAKGATGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNNGEPGAPGNKGDAGAKGEPGPVGVQGPPGPSGEEGKRGSRGEPGPAGLPGPAGERGAPGSRGFPGSDGIAGPKGPAGERGSPGPAGPKGSPGESGRPGEPGLPGAKGLTGSPGSPGPDGKTGPTGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKPGERGTPGPVGAVGAPGKDGEAGAQGPPGAAGPAGGNLNTWAFLFPSAQGLPGPAGPAGESGKPGEQEQGAPGDAGAPGPAGARGERGFPGERGVQGAPGPQGPRGSNGAPGNDGAKGDAGAPGSPGNQGPPGLQGMPGERGAAGLPGARGDRGDAGPKGADGTPGKDGPRGLTGPTPPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGSDGQPGAKGETGDSGAKGDAGPPGPAGPTGAPGPSGAVGAPGPKGARGSAGPPPPRRTSLPAASGATGPPGPSGNIGLPGPPGPSGKEGSKGPRGETGPAGRSGEPGPAGPPGPSGEKGSPGSDGAPGSPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGPSGERGPPGPVGPPGLAGPPGPAGRGGSPGAEGAPGRDGAAGPKGDRGETGPAGAPGAPGAPGAPGPVGPSGKNGDRGETGPAGPAGPAGPAGARGPAGPQGARGDKGETGEHGDRGMKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGSAGKDGLNGLPGPIGPPGPRGRTGDVGPAGPPGPPGPPGPPGAPSGGFDFSFMPQPPQEKAHTDSRYHRDERANAFLLLLLPVNSSLPPLLTSFLLPLRPPFTRPSPLPAGEYWIDPNQGCNLDAIKVYCHMETGETCVYTTQPSTAQKHWYISMGRRTSWLPLLVSLSSMQFEYGGEESNPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQETGNLKKALLLQGSNEIEIRAEGNSRFTYGVTEDGCTSHTGTWGKTVIEYKTTKTSRLPVIDVAPMDVGAPDQEFGIDVGPVCFL |
Keywords
- PTM
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 31-89 | VWFC | ||||
Sequence: GNCIQDGLTYSDKDVWKPEPCQICVCDSGNILCDEVICEDTSDCPNAEIPFGECCPICP | ||||||
Region | 95-1209 | Disordered | ||||
Sequence: PSYPETTGVEGPRGDPGPRGDRGPPGPPGRDGIPGQPGLPGPPGPPGPPGLGGNFAPQLSYGYDEKSVGGLSMPGPMGPAGPRGLPGPPGSPGPQGFQGPPGEPGEPGASGPMGPRGPAGPPGKNGDDGEAGKPGRPGERGAPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDTGPAGPKKRVPGSLGTGGPPGQIGPRGLPGERGRPGPSGPAGARGNDGAPGAAGPPGPTGPAGPPGFPGAVGAKGPVRPGGARGGAPSATGRGNPGSDGQPGAKGATGNPGSDGQPGAKGATGAPGIAGAPGFPGARGPSGPQGPSGAPGPKGNNGEPGAPGNKGDAGAKGEPGPVGVQGPPGPSGEEGKRGSRGEPGPAGLPGPAGERGAPGSRGFPGSDGIAGPKGPAGERGSPGPAGPKGSPGESGRPGEPGLPGAKGLTGSPGSPGPDGKTGPTGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKPGERGTPGPVGAVGAPGKDGEAGAQGPPGAAGPAGGNLNTWAFLFPSAQGLPGPAGPAGESGKPGEQEQGAPGDAGAPGPAGARGERGFPGERGVQGAPGPQGPRGSNGAPGNDGAKGDAGAPGSPGNQGPPGLQGMPGERGAAGLPGARGDRGDAGPKGADGTPGKDGPRGLTGPTPPPGPAGAPGDKGESGPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGSDGQPGAKGETGDSGAKGDAGPPGPAGPTGAPGPSGAVGAPGPKGARGSAGPPPPRRTSLPAASGATGPPGPSGNIGLPGPPGPSGKEGSKGPRGETGPAGRSGEPGPAGPPGPSGEKGSPGSDGAPGSPGTPGPQGIAGQRGVVGLPGQRGERGFPGLPGPSGEPGKQGPSGPSGERGPPGPVGPPGLAGPPGPAGRGGSPGAEGAPGRDGAAGPKGDRGETGPAGAPGAPGAPGAPGPVGPSGKNGDRGETGPAGPAGPAGPAGARGPAGPQGARGDKGETGEHGDRGMKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGSAGKDGLNGLPGPIGPPGPRGRTGDVGPAGPPGPPGPPGPPGAPSGGFDFSFMPQPPQEKAHTDSR | ||||||
Compositional bias | 112-146 | Pro residues | ||||
Sequence: PRGDRGPPGPPGRDGIPGQPGLPGPPGPPGPPGLG | ||||||
Compositional bias | 173-202 | Pro residues | ||||
Sequence: PAGPRGLPGPPGSPGPQGFQGPPGEPGEPG | ||||||
Compositional bias | 987-1004 | Pro residues | ||||
Sequence: GERGPPGPVGPPGLAGPP | ||||||
Compositional bias | 1090-1104 | Basic and acidic residues | ||||
Sequence: DKGETGEHGDRGMKG | ||||||
Compositional bias | 1171-1187 | Pro residues | ||||
Sequence: PAGPPGPPGPPGPPGAP | ||||||
Domain | 1206-1444 | Fibrillar collagen NC1 | ||||
Sequence: TDSRYHRDERANAFLLLLLPVNSSLPPLLTSFLLPLRPPFTRPSPLPAGEYWIDPNQGCNLDAIKVYCHMETGETCVYTTQPSTAQKHWYISMGRRTSWLPLLVSLSSMQFEYGGEESNPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQETGNLKKALLLQGSNEIEIRAEGNSRFTYGVTEDGCTSHTGTWGKTVIEYKTTKTSRLPVIDVAPMDVGAPDQEFGIDVGPVCFL |
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,444
- Mass (Da)136,868
- Last updated2013-01-09 v1
- Checksum1F0242D29ADFF46B
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 112-146 | Pro residues | ||||
Sequence: PRGDRGPPGPPGRDGIPGQPGLPGPPGPPGPPGLG | ||||||
Compositional bias | 173-202 | Pro residues | ||||
Sequence: PAGPRGLPGPPGSPGPQGFQGPPGEPGEPG | ||||||
Compositional bias | 987-1004 | Pro residues | ||||
Sequence: GERGPPGPVGPPGLAGPP | ||||||
Compositional bias | 1090-1104 | Basic and acidic residues | ||||
Sequence: DKGETGEHGDRGMKG | ||||||
Compositional bias | 1171-1187 | Pro residues | ||||
Sequence: PAGPPGPPGPPGPPGAP |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AGCU01053194 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AGCU01053195 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AGCU01053196 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AGCU01053197 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AGCU01053198 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AGCU01053199 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AGCU01053200 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AGCU01053201 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AGCU01053202 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. | |
AGCU01053203 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. |