K4IYV3 · K4IYV3_PRRSV
- ProteinPolyprotein 1aTF
- GeneORF1aTF
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids1402 (go to sequence)
- Protein existencePredicted
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | cytoplasm | |
Cellular Component | host cell endoplasmic reticulum | |
Cellular Component | host cell membrane | |
Cellular Component | host cell nucleus | |
Cellular Component | membrane | |
Molecular Function | ATP binding | |
Molecular Function | cysteine-type endopeptidase activity | |
Molecular Function | helicase activity | |
Molecular Function | metal ion binding | |
Biological Process | proteolysis | |
Biological Process | viral protein processing | |
Biological Process | viral translational frameshifting |
Keywords
- Molecular function
- Biological process
- Ligand
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Strain
- Taxonomic lineageViruses > Riboviria > Orthornavirae > Pisuviricota > Pisoniviricetes > Nidovirales > Arnidovirineae > Arteriviridae > Variarterivirinae > Betaarterivirus > Ampobartevirus > Betaarterivirus suid 2
- Virus hosts
Accessions
- Primary accessionK4IYV3
Proteomes
Subcellular Location
UniProt Annotation
GO Annotation
Membrane ; Multi-pass membrane protein
Features
Showing features for transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Transmembrane | 1247-1267 | Helical | ||||
Sequence: FSTRAVVILRVIGVLQLLLYC | ||||||
Transmembrane | 1274-1294 | Helical | ||||
Sequence: VIQHLVLLPSWVCFLGLLGAS | ||||||
Transmembrane | 1300-1324 | Helical | ||||
Sequence: AAGWLLLLVCSSLCPTQSALLVSLI | ||||||
Transmembrane | 1331-1350 | Helical | ||||
Sequence: SFILLSFSNLGTLFAALLWA | ||||||
Transmembrane | 1362-1382 | Helical | ||||
Sequence: YWAGHVASGTFCLGLALLQTV |
Keywords
- Cellular component
Structure
Family & Domains
Features
Showing features for domain, region, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 69-180 | Peptidase C31 | ||||
Sequence: ECSPAGACWLSAIFPIARMTSGNLNFQQRMVRVAAELYRAGQLTPAVLKALQVYERGCRWYPIVGPVPGVAVYANSLHVSDKPFPGATHVLTNLPLPQRPKPEDFCPFECAM | ||||||
Domain | 263-383 | Peptidase C32 | ||||
Sequence: DTVPEGNCWWSLFDSLPLEVQNKEIRHANQFGYQTKHGVSGKYLQRRLQVNGLRAVTDLNGPIVIQYFSVRESWIRHLKLAEEPGLPGFEDLLRIRVEPNTSPLANEDEKIFRFGSHKWYG | ||||||
Domain | 428-535 | Peptidase C33 | ||||
Sequence: RYSPPAEGNCGWHCISAIANRMVNSKFKTTLPERVRPPDDWATDEDLVNAIQILRLPAALDRNGACASAKYVLKLEGEHWTVTVTPGMSPSLLPLECVQGCCEHKGGL | ||||||
Region | 809-884 | Disordered | ||||
Sequence: RWTPPPPPPKVQPRKTKSAKSLLERKPVPAPRRKVGTNCGSPISLGDNIPNSWEDLAVGSPYDPPTPPEPATPSGE | ||||||
Compositional bias | 825-839 | Basic and acidic residues | ||||
Sequence: KSAKSLLERKPVPAP | ||||||
Region | 897-983 | Disordered | ||||
Sequence: PATPSSEPALIPASRGAVSRPVTPLSEPIPVPAPRRKFQQVKRLSSAAVTPPYQDEPLNLSASSQTEFEAPSLAPPQSEGVLGVKGQ | ||||||
Compositional bias | 952-968 | Polar residues | ||||
Sequence: EPLNLSASSQTEFEAPS | ||||||
Region | 1152-1212 | Disordered | ||||
Sequence: TNQGPLAFSEDKPVDDQLAKDPRISSQSPDESTSAPPTGTGGAGSFTDLPPSDGADADGGG | ||||||
Compositional bias | 1172-1192 | Polar residues | ||||
Sequence: DPRISSQSPDESTSAPPTGTG |
Keywords
- Domain
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,402
- Mass (Da)152,925
- Last updated2013-01-09 v1
- ChecksumC5DB249B07C10BF0
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 825-839 | Basic and acidic residues | ||||
Sequence: KSAKSLLERKPVPAP | ||||||
Compositional bias | 952-968 | Polar residues | ||||
Sequence: EPLNLSASSQTEFEAPS | ||||||
Compositional bias | 1172-1192 | Polar residues | ||||
Sequence: DPRISSQSPDESTSAPPTGTG |
Keywords
- Coding sequence diversity