K4IYV3 · K4IYV3_PRRSV

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasm
Cellular Componenthost cell endoplasmic reticulum
Cellular Componenthost cell membrane
Cellular Componenthost cell nucleus
Cellular Componentmembrane
Molecular FunctionATP binding
Molecular Functioncysteine-type endopeptidase activity
Molecular Functionhelicase activity
Molecular Functionmetal ion binding
Biological Processproteolysis
Biological Processviral protein processing
Biological Processviral translational frameshifting

Keywords

Names & Taxonomy

Protein names

  • Submitted names
    • Polyprotein 1aTF

Gene names

    • Name
      ORF1aTF

Organism names

Accessions

  • Primary accession
    K4IYV3

Proteomes

Subcellular Location

Cytoplasm
Host cytoplasm
Host nucleus
Membrane
; Multi-pass membrane protein

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane1247-1267Helical
Transmembrane1274-1294Helical
Transmembrane1300-1324Helical
Transmembrane1331-1350Helical
Transmembrane1362-1382Helical

Keywords

Family & Domains

Features

Showing features for domain, region, compositional bias.

TypeIDPosition(s)Description
Domain69-180Peptidase C31
Domain263-383Peptidase C32
Domain428-535Peptidase C33
Region809-884Disordered
Compositional bias825-839Basic and acidic residues
Region897-983Disordered
Compositional bias952-968Polar residues
Region1152-1212Disordered
Compositional bias1172-1192Polar residues

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    1,402
  • Mass (Da)
    152,925
  • Last updated
    2013-01-09 v1
  • Checksum
    C5DB249B07C10BF0
MSGILDRCTCTPNARVFMAEGQVYCTRCLSARSLLPLSLQVSELGVLGLFYRPEEPLRWTLPRAFPTVECSPAGACWLSAIFPIARMTSGNLNFQQRMVRVAAELYRAGQLTPAVLKALQVYERGCRWYPIVGPVPGVAVYANSLHVSDKPFPGATHVLTNLPLPQRPKPEDFCPFECAMATVYDIGRDAVMYVTEGKVSWAPRGGDETRFETVPGGLKLIADQLYSSFPPHHTVDMSKFAFTAPGRGVSMRVERQCGCLPADTVPEGNCWWSLFDSLPLEVQNKEIRHANQFGYQTKHGVSGKYLQRRLQVNGLRAVTDLNGPIVIQYFSVRESWIRHLKLAEEPGLPGFEDLLRIRVEPNTSPLANEDEKIFRFGSHKWYGAGRRARKARHSAITAVAGRASSAREIQQAKKHEAADANKVEHLKRYSPPAEGNCGWHCISAIANRMVNSKFKTTLPERVRPPDDWATDEDLVNAIQILRLPAALDRNGACASAKYVLKLEGEHWTVTVTPGMSPSLLPLECVQGCCEHKGGLGTPDAVEVFGFDPACLNWLAEVMHLPSSAIPAALAEMSGDSGRSASPVTTVWTVSQFFARHNGGSHPDQVRLGKIISLCQVIEDCCCSQNKTNRVTPEEVAAKIDLYLRGATSLEECLARLEKARPPRVMDTSFDWDVVLPGVEAATQTTELPQVNQCRALVPVVTQKSLDNNSVPLTAFSLANYYYRAQGEEVRHRERLTAVLSKLEGVVREEYGLMPTGPGPRPTLPRGLDELKDQMEEDLLKLANAQTTSEMMAWAVEQVDLKTWVKNYPRWTPPPPPPKVQPRKTKSAKSLLERKPVPAPRRKVGTNCGSPISLGDNIPNSWEDLAVGSPYDPPTPPEPATPSGELVVVSTPQCIFRPATPSSEPALIPASRGAVSRPVTPLSEPIPVPAPRRKFQQVKRLSSAAVTPPYQDEPLNLSASSQTEFEAPSLAPPQSEGVLGVKGQEAEEALSEISDMSGDIKPASVSSSSSLSSVRVTRPKYSAQAIIDLGGPCSGHLQEVKEACLGIMREACDATKLDDPATQEWLSRMWDRVDMLTWRNTSAYQAFRTLDGRLKFLPKMILETPPPYPCEFVMMPHSPAPSVGAESDLTIGSVATEDVPRILEKIENVGEMTNQGPLAFSEDKPVDDQLAKDPRISSQSPDESTSAPPTGTGGAGSFTDLPPSDGADADGGGPFRTIKRKAEGLFDRLSRQVFLTSSPISLFSSHAFSTRAVVILRVIGVLQLLLYCASFYATVIQHLVLLPSWVCFLGLLGASEWGFLAAGWLLLLVCSSLCPTQSALLVSLIRQSVETSFILLSFSNLGTLFAALLWAPSVSVLPFLAGYWAGHVASGTFCLGLALLQTVSWLELMCFLKAGVKSAGDLV

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias825-839Basic and acidic residues
Compositional bias952-968Polar residues
Compositional bias1172-1192Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JX258843
EMBL· GenBank· DDBJ
AFU75333.1
EMBL· GenBank· DDBJ
Genomic RNA

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