J2UGL6 · J2UGL6_9PSED

  • Protein
    Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD
  • Gene
    arnD
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Inferred from homology
  • Annotation score
    3/5

Function

function

Catalyzes the deformylation of 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

Catalytic activity

Pathway

Bacterial outer membrane biogenesis; lipopolysaccharide biosynthesis.
Glycolipid biosynthesis; 4-amino-4-deoxy-alpha-L-arabinose undecaprenyl phosphate biosynthesis; 4-amino-4-deoxy-alpha-L-arabinose undecaprenyl phosphate from UDP-4-deoxy-4-formamido-beta-L-arabinose and undecaprenyl phosphate: step 2/2.

GO annotations

AspectTerm
Cellular Componentmembrane
Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
Molecular Functionhydrolase activity, acting on glycosyl bonds
Biological Process4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate biosynthetic process
Biological Processlipid A biosynthetic process
Biological Processlipopolysaccharide biosynthetic process
Biological Processresponse to antibiotic
Biological Processxylan catabolic process

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD
  • EC number

Gene names

    • Name
      arnD
    • ORF names
      PMI34_04031

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • GM74
  • Taxonomic lineage
    Bacteria > Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Accessions

  • Primary accession
    J2UGL6

Proteomes

Subcellular Location

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain1-259NodB homology

Sequence similarities

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    294
  • Mass (Da)
    32,791
  • Last updated
    2012-10-03 v1
  • Checksum
    E056A265E51BE7FE
MQAGLRIDVDTYRGTREGVPRLLEILDEAQVKATFFFSVGPDNMGRHLWRLIRPQFLWKMLRSNAAGLYGWDILLAGTAWPGKLIGRDLGHLMRQARDAGHEVGLHTWDHHGWQANAGTWSDAQLIEQIRKGVDTLSDILGEKVDCSAVAGWRADERVIEAKQGFGFRYNSDCRGQSLFRPRLANGQLGTPQIPVDLPTFDEVVGPSVAAKDFNSFILDRFTPGKLNVYTIHAEVEGILMANDFRQLLNDARQRDIRFQPLGDLLPQAPDSLPVGRVVRGSLEGREGWLGVQGA

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AKJG01000106
EMBL· GenBank· DDBJ
EJM86134.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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