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I0CJW3 · I0CJW3_9TELE

Function

Caution

Lacks conserved residue(s) required for the propagation of feature annotation.

Features

Showing features for site, binding site.

129020406080100120140160180200220240260280
Type
IDPosition(s)Description
Site101Plays an important role in the conformation switch to the active conformation
Binding site189Zn2+ (UniProtKB | ChEBI)

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentmembrane
Cellular Componentphotoreceptor outer segment
Molecular FunctionG protein-coupled photoreceptor activity
Molecular Functionmetal ion binding
Biological Processcellular response to light stimulus
Biological Processphototransduction
Biological Processvisual perception

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Rhodopsin

Gene names

    • Name
      Rho

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Actinopterygii > Neopterygii > Teleostei > Ostariophysi > Cypriniformes > Leuciscidae > Pogonichthyinae > Nocomis

Accessions

  • Primary accession
    I0CJW3

Subcellular Location

Membrane
; Multi-pass membrane protein

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane23-51Helical
Transmembrane63-83Helical
Transmembrane103-121Helical
Transmembrane141-161Helical
Transmembrane191-211Helical
Transmembrane242-264Helical

Keywords

  • Cellular component

PTM/Processing

Features

Showing features for disulfide bond, modified residue.

Type
IDPosition(s)Description
Disulfide bond98↔175
Modified residue284N6-(retinylidene)lysine

Post-translational modification

Contains one covalently linked retinal chromophore.

Keywords

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain42-290G-protein coupled receptors family 1 profile

Sequence similarities

Belongs to the G-protein coupled receptor 1 family. Opsin subfamily.

Keywords

Family and domain databases

Protein family/group databases

Sequence

  • Sequence status
    Fragment
  • Length
    290
  • Mass (Da)
    32,925
  • Last updated
    2018-10-10 v2
  • MD5 Checksum
    44840205F5BEC084375570E60EE6D189
MSNASGVDRSPYEYPQYYLAEPWAYACLAAYMFFLILTGFPINFLTLYVTLEHKKLRTPLNYILLNLAVADLFMVFGGFTTTIYTSMHGYFVLGRLGCNLEGFFATLGGEIALWSIVTLAIERWLVVCKPITNFRFGEDHAIMGVVFTWVMACSCAVPPLVGWSRYIPEGMQCSCGVDYYTRAEGYNNESFVIYMFLVHALIPFCVIFFCYGRLVCTVKEAAAQQQESETTQRAEREVTRMVILMGFAYLVCWLPYASVAWYIFTHKGAEFGPIFMTIPAFFAKTSAVYT

Features

Showing features for non-terminal residue, sequence uncertainty.

Type
IDPosition(s)Description
Non-terminal residue1
Sequence uncertainty178D or N
Non-terminal residue290

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JQ712219
EMBL· GenBank· DDBJ
AFH77410.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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