H6VQD9 · H6VQD9_9PICO

  • Protein
    Genome polyprotein
  • Status
    UniProtKB unreviewed (TrEMBL)
  • Amino acids
  • Protein existence
    Predicted
  • Annotation score
    3/5

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytoplasmic vesicle membrane
Cellular Componenthost cell cytoplasmic vesicle membrane
Cellular Componenticosahedral viral capsid
Molecular FunctionATP binding
Molecular Functionchannel activity
Molecular Functioncysteine-type endopeptidase activity
Molecular FunctionRNA binding
Molecular FunctionRNA helicase activity
Molecular FunctionRNA-dependent RNA polymerase activity
Molecular Functionstructural molecule activity
Biological ProcessDNA-templated transcription
Biological Processmonoatomic ion transmembrane transport
Biological Processproteolysis
Biological Processsymbiont entry into host cell
Biological Processviral RNA genome replication
Biological Processvirion attachment to host cell

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Genome polyprotein

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • CC25
  • Taxonomic lineage
    Viruses > Riboviria > Orthornavirae > Pisuviricota > Pisoniviricetes > Picornavirales > Picornaviridae > Caphthovirinae > Teschovirus

Accessions

  • Primary accession
    H6VQD9

Proteomes

Subcellular Location

Cytoplasmic vesicle membrane
; Peripheral membrane protein
Host cytoplasmic vesicle membrane
; Peripheral membrane protein
Membrane
; Peripheral membrane protein
Virion

Features

Showing features for transmembrane.

TypeIDPosition(s)Description
Transmembrane1036-1054Helical
Transmembrane1502-1523Helical

Keywords

PTM/Processing

Keywords

Family & Domains

Features

Showing features for domain.

TypeIDPosition(s)Description
Domain1203-1367SF3 helicase
Domain1555-1744Peptidase C3
Domain1983-2095RdRp catalytic

Keywords

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    2,207
  • Mass (Da)
    247,333
  • Last updated
    2016-04-13 v2
  • Checksum
    7F38D3E4C8261335
MECLKIFSLKPKNKSHSYSPRGIELKYNSDFAFKPRPLAPLLRLEPSDTTTRRIECADIEYDSWYPNPLDPTSLVCDVKLEMLQFQGTGTSRMENGNTNNSGNTGVINYNFYSNSYTDAVDLSGAMSSQESNAAENAASGPTSLLKAGINAAAKIGPLLAEPNFEEYRMSDRVDIIQKGTSTIITQNSVGSNTYTHCPKSSVTSVADEGTSGGPAVSRFVTLKAKPWSSTQSVYAFQAAHLPYALVAQNTPFKSLLSKHQLMKCCWMVQVQVNTTRFHGGCLGVFAIPEFSVCHKLNGISDTYAGNRDGDVSYIWDKFTAWHNPDAMYGAWYYKHVYDSTDKHWYKPKLEQYGGISPQSLFCFPHQLINPRTNSSATLCLPFVDCGPITDVTVHCPWAIVVVVLRQLTVATGGTPSVDINVSVAPCDVEYHGLRQNSMYESPIPKIDIDASKALFSSTQPYTAPPVYGKIPASSPAFMPGEFLDYVQLAQIPSLVKSREIRVTSSEKTTPIFHMPLRPTDIQTMNTMLGSATRMFTQWRGSIVIRCVFVGNQMQNCRLLIAWTPQGFNADYPRRMEDAMQGHYVIYDTGIDSSADLVVPYVAPYDFTPVRTPYTRTELPPTNNPAPVLVNTPYWSRGYITIWQYTNLASPPGSPSQADFLLFVFAGEDYVLKGPSNMAASYQGGENSPLQSAETGCDKAMSDKASNENPIPLAVENIGSSRVDFFWNRYFHVATITEVSNVKPQYLRLNISDILSDPVVRQSLHATYLRCGLSIAVRVMPANTSSTDCMDGLTINMLYVPPGSSWAIDDIESTKPIEQAQDSTGNYALPSFTWKPNQTPVFTCSVPYVSFTTVLPTAYAGIESSSLIPKRNNQIPQDFGFGLLVLRSSMPPAHNLVVSVWVKFNNVRLFCPRPGIFDYKSYSNESIAIPDTETGQFSNTMTTMALQGPGATNFSLLKQAGDIEENPGPSLSKLYQILKDPAVDALCEAYDELKKFKEQATNLLDSFSGDSENPWLNKFIKYLGYAILAWKSLHDPMTAAAVCFIIGSDITAFVVSKLAKHLKKFAKTDPPPVPKPRACKKEGCCCGNKHNYPDELNPFSENGFWSRFKKGHLQGPMQDVSSLINILKGAEWIYHQFEKVIKWLKTWRTAEYEVSSDFLQNEMKNYPHYYRKYKECANNYRHPDRTEVAEYFRKMRKCAAHVNPRLMGMFPEFDPSPPDPTRPEPVVVVLRGAPGQGKSVCSEMLARMLSYTLVGKSSYYAFNSATKHFDGYKQQAVTIIDDLGQDTSGEDFRLFCQLVSTTECIVPMADLPDKGMHFKSEILIANTNLPSFNPITVSDPAAIKRRIFLDLTVEANRAYTKPDGTLDLVRALQPTGKESQSPLLRQDHNILYSDCVAFKHGKYTLSFLEVFDMIKRELQRRQNVSNSLTNLFTFQGPSDDSWFTTFYKKWNLRAKENSEEKLILELIRYCHGSDMLKEYCQLAAANKERKTDYWNMVRIIEEILAALTLILSLISIMIVMYQLFFQGPYEAAATKPAKPNRQSLLKLVEMQGPKGQANMEMERTLMKKNIVEMTYEKHNGKFQTTTVLFVRDRIFLINTHILTSIKNFHYENTEIPAASVQKVQAIFDGHSSDVTAVQFTVGRQYRDITNNFINSLPNPGTPIVGLMKTEGSSYIWSGESLPFKNTMNTYEGCVPHVLPYKAVTAHGYCGSVVVADAGVWKGICGIHSLGDGAIGAATVLSRQHLLNLLEGFLEFQGKIYDVQKADFVYTPTRTSLKPTFMCVDPKLEPAALSHLDPRLKEPENFKAVILSKHVGDSLQLPWGIRWASYKYAERIRAMLPPDFLEPLSVREAVEGIDGLDPMDMDKSPGLPYVKKGLRRTDLWNPKTGPSLELMAEINRYLDYNYDKHVFLTFLKDELRPKEKVQAGKTRVIDVAGFGHAIVGRMLFGRLFAFFHKNPGWNTGSAVGVNPDLAWTQIFYTAPSRNVLAMDYSGFDASHTSGMFCILKHFLTTLGYGTLQLSYIDSLCYSKHHWDDETYRLDGGLPSGCSGTTIFNTIMNNIVARAAASYAAEGPVGILCYGDDILVSSPEKFPVSDWLEFYSKTPYKVTAADKSEQIDWRDITQCTFLKRGFVLDGSLVRPVMEEQHLAELLKWARPGTLQAKLLSIAQLAFHLPRSAYDRLMLPFEEAGYEIPSHERLNEEWREMFI

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JN859128
EMBL· GenBank· DDBJ
AFB77227.2
EMBL· GenBank· DDBJ
Genomic RNA

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