H3BKF6 · H3BKF6_MOUSE
- ProteinCut-like homeobox 1
- GeneCux1
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids1389 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score2/5
Function
Features
Showing features for dna binding.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
DNA binding | 1113-1172 | Homeobox | ||||
Sequence: LKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRREL |
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA binding | |
Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific |
Keywords
- Molecular function
Names & Taxonomy
Protein names
- Submitted names
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Mus > Mus
Accessions
- Primary accessionH3BKF6
Proteomes
Organism-specific databases
Subcellular Location
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Region | 38-68 | Disordered | ||||
Sequence: KEQKLQNDFAEKERKLQETQMSTTSKLEEAE | ||||||
Region | 267-338 | Disordered | ||||
Sequence: ENATLRISNSDLSGSARRKGRDQPESRRPGPLPASPPPQLPRNTGEQVSNTNGTHHFSPAGLSQDFFSSNLA | ||||||
Compositional bias | 307-338 | Polar residues | ||||
Sequence: PRNTGEQVSNTNGTHHFSPAGLSQDFFSSNLA | ||||||
Compositional bias | 376-418 | Polar residues | ||||
Sequence: STIFSTGPYSTNSISSPSPLQQSPDVNGMAPSPSQSESAGSIS | ||||||
Region | 376-425 | Disordered | ||||
Sequence: STIFSTGPYSTNSISSPSPLQQSPDVNGMAPSPSQSESAGSISEGEEIDT | ||||||
Domain | 414-501 | CUT | ||||
Sequence: AGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGR | ||||||
Region | 518-540 | Disordered | ||||
Sequence: PKRRNGSEGNITTRIRASETGSD | ||||||
Compositional bias | 522-536 | Polar residues | ||||
Sequence: NGSEGNITTRIRASE | ||||||
Region | 553-577 | Disordered | ||||
Sequence: ELQVQKTAEPVQTSSTSSSGNSDDA | ||||||
Compositional bias | 558-577 | Polar residues | ||||
Sequence: KTAEPVQTSSTSSSGNSDDA | ||||||
Region | 592-611 | Disordered | ||||
Sequence: QQAALDPALKPAPLSQPDLT | ||||||
Region | 643-798 | Disordered | ||||
Sequence: PETSTAALPSAPALKKEAQDVPTLDPPGSADAAQGVLRPMKSELVRGSTWKDPWWSPIQPERRNLTSSEETKADETTASGKERAGSSQPRAERSQLQGPSASAEYWKEWPSAESPYSQSSELSLTGASRSETPQNSPLPSSPIVPMAKPAKPSVPP | ||||||
Compositional bias | 707-721 | Basic and acidic residues | ||||
Sequence: LTSSEETKADETTAS | ||||||
Compositional bias | 722-743 | Polar residues | ||||
Sequence: GKERAGSSQPRAERSQLQGPSA | ||||||
Compositional bias | 754-779 | Polar residues | ||||
Sequence: AESPYSQSSELSLTGASRSETPQNSP | ||||||
Compositional bias | 780-798 | Pro residues | ||||
Sequence: LPSSPIVPMAKPAKPSVPP | ||||||
Domain | 803-890 | CUT | ||||
Sequence: QYEVYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQ | ||||||
Compositional bias | 906-947 | Polar residues | ||||
Sequence: QQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPC | ||||||
Region | 906-981 | Disordered | ||||
Sequence: QQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPAIETSKEGKPPEPSDPPASDSQPTTPLPLSGHS | ||||||
Domain | 986-1073 | CUT | ||||
Sequence: QELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRM | ||||||
Region | 1081-1115 | Disordered | ||||
Sequence: RRHSSVSDSQPCEPPSVGIDYSQGASPQPQHQLKK | ||||||
Domain | 1111-1171 | Homeobox | ||||
Sequence: HQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRE | ||||||
Compositional bias | 1182-1202 | Polar residues | ||||
Sequence: QGQAGASDSPSARSSRAAPSS | ||||||
Region | 1182-1357 | Disordered | ||||
Sequence: QGQAGASDSPSARSSRAAPSSEGDSCDGVEATDAEEPGGNIVATKSQGGLAEVAAAPADREEATQPAEKAKAQPLCSGTPGQDDGEDASRPRPLPEGLADAPAPVPSLAAPAAGEDAATSATAPATATEAPGAARAGPAERSSALPSTSAPANAPARRPSSLQSLFGLPEAAGARD | ||||||
Compositional bias | 1323-1341 | Polar residues | ||||
Sequence: SSALPSTSAPANAPARRPS |
Sequence similarities
Belongs to the CUT homeobox family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusFragment
- Length1,389
- Mass (Da)151,052
- Last updated2014-02-19 v2
- ChecksumCF824F061E404733
Computationally mapped potential isoform sequences
There are 12 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
P53564 | CUX1_MOUSE | Cux1 | 1515 | ||
H3BLS0 | H3BLS0_MOUSE | Cux1 | 1509 | ||
H3BLJ7 | H3BLJ7_MOUSE | Cux1 | 472 | ||
H3BKT0 | H3BKT0_MOUSE | Cux1 | 676 | ||
H3BL09 | H3BL09_MOUSE | Cux1 | 199 | ||
H3BJQ9 | H3BJQ9_MOUSE | Cux1 | 1517 | ||
H3BK24 | H3BK24_MOUSE | Cux1 | 1504 | ||
H3BJL7 | H3BJL7_MOUSE | Cux1 | 268 | ||
H3BJN3 | H3BJN3_MOUSE | Cux1 | 678 | ||
H3BJ26 | H3BJ26_MOUSE | Cux1 | 543 | ||
P70403 | CASP_MOUSE | Cux1 | 678 | ||
E9QKE9 | E9QKE9_MOUSE | Cux1 | 1426 |
Features
Showing features for non-terminal residue, compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Non-terminal residue | 1 | |||||
Sequence: X | ||||||
Compositional bias | 307-338 | Polar residues | ||||
Sequence: PRNTGEQVSNTNGTHHFSPAGLSQDFFSSNLA | ||||||
Compositional bias | 376-418 | Polar residues | ||||
Sequence: STIFSTGPYSTNSISSPSPLQQSPDVNGMAPSPSQSESAGSIS | ||||||
Compositional bias | 522-536 | Polar residues | ||||
Sequence: NGSEGNITTRIRASE | ||||||
Compositional bias | 558-577 | Polar residues | ||||
Sequence: KTAEPVQTSSTSSSGNSDDA | ||||||
Compositional bias | 707-721 | Basic and acidic residues | ||||
Sequence: LTSSEETKADETTAS | ||||||
Compositional bias | 722-743 | Polar residues | ||||
Sequence: GKERAGSSQPRAERSQLQGPSA | ||||||
Compositional bias | 754-779 | Polar residues | ||||
Sequence: AESPYSQSSELSLTGASRSETPQNSP | ||||||
Compositional bias | 780-798 | Pro residues | ||||
Sequence: LPSSPIVPMAKPAKPSVPP | ||||||
Compositional bias | 906-947 | Polar residues | ||||
Sequence: QQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPC | ||||||
Compositional bias | 1182-1202 | Polar residues | ||||
Sequence: QGQAGASDSPSARSSRAAPSS | ||||||
Compositional bias | 1323-1341 | Polar residues | ||||
Sequence: SSALPSTSAPANAPARRPS |
Keywords
- Technical term