H3BJQ9 · H3BJQ9_MOUSE
- ProteinHomeobox protein cut-like
- GeneCux1
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids1517 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score2/5
Function
Features
Showing features for dna binding.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
DNA binding | 1241-1300 | Homeobox | ||||
Sequence: LKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRREL |
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | Golgi apparatus | |
Cellular Component | nucleoplasm | |
Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | |
Molecular Function | sequence-specific double-stranded DNA binding |
Keywords
- Molecular function
- Biological process
Names & Taxonomy
Protein names
- Recommended nameHomeobox protein cut-like
Gene names
Organism names
- Organism
- Strain
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Glires > Rodentia > Myomorpha > Muroidea > Muridae > Murinae > Mus > Mus
Accessions
- Primary accessionH3BJQ9
Proteomes
Organism-specific databases
Subcellular Location
PTM/Processing
Proteomic databases
Expression
Gene expression databases
Family & Domains
Features
Showing features for coiled coil, region, compositional bias, domain.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Coiled coil | 101-344 | |||||
Sequence: LEIKVQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQTLKSQAETIALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKLQTLQTALEKTRTELFDLKTKYDEETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLNAKNSTLKQLEEK | ||||||
Region | 395-455 | Disordered | ||||
Sequence: ENATLRISNSDLSGSARRKGRDQPESRRPGPLPASPPPQLPRNTGEQVSNTNGTHHFSPAG | ||||||
Compositional bias | 435-455 | Polar residues | ||||
Sequence: PRNTGEQVSNTNGTHHFSPAG | ||||||
Compositional bias | 511-546 | Polar residues | ||||
Sequence: PYSTNSISSPSPLQQSPDVNGMAPSPSQSESAGSIS | ||||||
Region | 511-548 | Disordered | ||||
Sequence: PYSTNSISSPSPLQQSPDVNGMAPSPSQSESAGSISEG | ||||||
Domain | 542-629 | CUT | ||||
Sequence: AGSISEGEEIDTAEIARQVKEQLIKHNIGQRIFGHYVLGLSQGSVSEILARPKPWNKLTVRGKEPFHKMKQFLSDEQNILALRSIQGR | ||||||
Region | 646-668 | Disordered | ||||
Sequence: PKRRNGSEGNITTRIRASETGSD | ||||||
Compositional bias | 650-664 | Polar residues | ||||
Sequence: NGSEGNITTRIRASE | ||||||
Region | 682-704 | Disordered | ||||
Sequence: LQVQKTAEPVQTSSTSSSGNSDD | ||||||
Compositional bias | 686-704 | Polar residues | ||||
Sequence: KTAEPVQTSSTSSSGNSDD | ||||||
Region | 771-873 | Disordered | ||||
Sequence: PETSTAALPSAPALKKEAQDVPTLDPPGSADAAQGVLRPMKSELVRGSTWKDPWWSPIQPERRNLTSSEETKADETTASGKERAGSSQPRAERSQLQGPSASA | ||||||
Compositional bias | 835-849 | Basic and acidic residues | ||||
Sequence: LTSSEETKADETTAS | ||||||
Compositional bias | 850-871 | Polar residues | ||||
Sequence: GKERAGSSQPRAERSQLQGPSA | ||||||
Compositional bias | 886-907 | Polar residues | ||||
Sequence: YSQSSELSLTGASRSETPQNSP | ||||||
Region | 886-925 | Disordered | ||||
Sequence: YSQSSELSLTGASRSETPQNSPLPSSPIVPMAKPAKPSVP | ||||||
Compositional bias | 908-925 | Pro residues | ||||
Sequence: LPSSPIVPMAKPAKPSVP | ||||||
Domain | 931-1018 | CUT | ||||
Sequence: QYEVYMYQEVDTIELTRQVKEKLAKNGICQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLNGELGQGVLPVQGQQ | ||||||
Compositional bias | 1034-1075 | Polar residues | ||||
Sequence: QQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPC | ||||||
Region | 1034-1107 | Disordered | ||||
Sequence: QQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPCPAIETSKEGKPPEPSDPPASDSQPTTPLPLSG | ||||||
Domain | 1114-1201 | CUT | ||||
Sequence: QELVAMSPELDTYGITKRVKEVLTDNNLGQRLFGETILGLTQGSVSDLLARPKPWHKLSLKGREPFVRMQLWLNDPNNVEKLMDMKRM | ||||||
Region | 1209-1244 | Disordered | ||||
Sequence: RRHSSVSDSQPCEPPSVGIDYSQGASPQPQHQLKKP | ||||||
Domain | 1239-1299 | Homeobox | ||||
Sequence: HQLKKPRVVLAPEEKEALKRAYQQKPYPSPKTIEELATQLNLKTSTVINWFHNYRSRIRRE | ||||||
Compositional bias | 1309-1330 | Polar residues | ||||
Sequence: SQGQAGASDSPSARSSRAAPSS | ||||||
Region | 1309-1472 | Disordered | ||||
Sequence: SQGQAGASDSPSARSSRAAPSSEGDSCDGVEATDAEEPGGNIVATKSQGGLAEVAAAPADREEATQPAEKAKAQPLCSGTPGQDDGEDASRPRPLPEGLADAPAPVPSLAAPAAGEDAATSATAPATATEAPGAARAGPAERSSALPSTSAPANAPARRPSSLQ | ||||||
Compositional bias | 1451-1469 | Polar residues | ||||
Sequence: SSALPSTSAPANAPARRPS |
Sequence similarities
Belongs to the CUT homeobox family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length1,517
- Mass (Da)165,770
- Last updated2012-04-18 v1
- ChecksumB3A17971EEB86D71
Computationally mapped potential isoform sequences
There are 12 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
P53564 | CUX1_MOUSE | Cux1 | 1515 | ||
H3BLS0 | H3BLS0_MOUSE | Cux1 | 1509 | ||
H3BLJ7 | H3BLJ7_MOUSE | Cux1 | 472 | ||
H3BKT0 | H3BKT0_MOUSE | Cux1 | 676 | ||
H3BL09 | H3BL09_MOUSE | Cux1 | 199 | ||
H3BKF6 | H3BKF6_MOUSE | Cux1 | 1389 | ||
H3BK24 | H3BK24_MOUSE | Cux1 | 1504 | ||
H3BJL7 | H3BJL7_MOUSE | Cux1 | 268 | ||
H3BJN3 | H3BJN3_MOUSE | Cux1 | 678 | ||
H3BJ26 | H3BJ26_MOUSE | Cux1 | 543 | ||
P70403 | CASP_MOUSE | Cux1 | 678 | ||
E9QKE9 | E9QKE9_MOUSE | Cux1 | 1426 |
Features
Showing features for compositional bias.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Compositional bias | 435-455 | Polar residues | ||||
Sequence: PRNTGEQVSNTNGTHHFSPAG | ||||||
Compositional bias | 511-546 | Polar residues | ||||
Sequence: PYSTNSISSPSPLQQSPDVNGMAPSPSQSESAGSIS | ||||||
Compositional bias | 650-664 | Polar residues | ||||
Sequence: NGSEGNITTRIRASE | ||||||
Compositional bias | 686-704 | Polar residues | ||||
Sequence: KTAEPVQTSSTSSSGNSDD | ||||||
Compositional bias | 835-849 | Basic and acidic residues | ||||
Sequence: LTSSEETKADETTAS | ||||||
Compositional bias | 850-871 | Polar residues | ||||
Sequence: GKERAGSSQPRAERSQLQGPSA | ||||||
Compositional bias | 886-907 | Polar residues | ||||
Sequence: YSQSSELSLTGASRSETPQNSP | ||||||
Compositional bias | 908-925 | Pro residues | ||||
Sequence: LPSSPIVPMAKPAKPSVP | ||||||
Compositional bias | 1034-1075 | Polar residues | ||||
Sequence: QQGCVSSESTPKTSASCSPAPESPMSSSESVKSLTELVQQPC | ||||||
Compositional bias | 1309-1330 | Polar residues | ||||
Sequence: SQGQAGASDSPSARSSRAAPSS | ||||||
Compositional bias | 1451-1469 | Polar residues | ||||
Sequence: SSALPSTSAPANAPARRPS |
Keywords
- Technical term