G7J1L1 · TF80_MEDTR

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentnucleus
Molecular FunctionDNA-binding transcription factor activity
Molecular Functionsequence-specific DNA binding
Biological Processregulation of DNA-templated transcription
Biological Processresponse to symbiotic fungus

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    GRAS family protein TF80

Gene names

    • Name
      TF80
    • ORF names
      MtrunA17_Chr3g0085681
    • Ordered locus names
      MTR_3g022830

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Jemalong A17
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Fabales > Fabaceae > Papilionoideae > 50 kb inversion clade > NPAAA clade > Hologalegina > IRL clade > Trifolieae > Medicago

Accessions

  • Primary accession
    G7J1L1

Proteomes

Genome annotation databases

Subcellular Location

Keywords

PTM/Processing

Features

Showing features for chain.

TypeIDPosition(s)Description
ChainPRO_00004500261-438GRAS family protein TF80

Proteomic databases

Expression

Induction

Accumulates in roots, in a RAM1-dependent manner, during colonization by arbuscular mycorrhizal fungi (e.g. Glomus versiforme).

Interaction

Subunit

Interacts with RAM1.

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for domain, region, motif.

Type
IDPosition(s)Description
Domain13-436GRAS
Region20-81Leucine repeat I (LRI)
Region100-165VHIID
Motif131-135VHIID
Region175-207Leucine repeat II (LRII)
Region216-359PFYRE
Motif224-228LXXLL motif
Region362-436SAW

Sequence similarities

Belongs to the GRAS family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    438
  • Mass (Da)
    49,706
  • Last updated
    2012-01-25 v1
  • Checksum
    694EB7B6651553A2
MDSGSPYHWLRELRYDSHGSNPMIPLIECAKCVASGSIKTADIGLEYISQISSPHGNGVQRMVTYFSEALGYKIVKHLPGVYKALNSSKISLSSDDILVQKYFYDLCPFLKFSYLITNQAIIESMEREKVVHIIDLHCSEPAQWINLIQTLKKRPGGPPFLKITGINEKKEALEQMSFHLTTEAGILDFPLQFNPIISKLEDVDFENLPVKTGDAVAISSVLQLHSLLATDDEMVSSSGAASFNMQRAAHLGQRTFAEWLERDMINAYILSPDSALSPLFLGASPKMGIFLNAMRKLQPKLLVITEQESNLNGCNLTERIDRALYFYGSLFDCLESTVTRTSVERQKLESMLLGEQIKNIITCEGVDRKERHEKLEQWIQRLKMAGFVKVPLSYNGRIEATNLLQRYSHKYKFKEENDCLLVCWSDRPLFSVSAWKFR

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CM001219
EMBL· GenBank· DDBJ
AES69125.1
EMBL· GenBank· DDBJ
Genomic DNA
PSQE01000003
EMBL· GenBank· DDBJ
RHN65965.1
EMBL· GenBank· DDBJ
Genomic DNA

Genome annotation databases

Similar Proteins

Disclaimer

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