G7J1L1 · TF80_MEDTR
- ProteinGRAS family protein TF80
- GeneTF80
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids438 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nucleus | |
Molecular Function | DNA-binding transcription factor activity | |
Molecular Function | sequence-specific DNA binding | |
Biological Process | regulation of DNA-templated transcription | |
Biological Process | response to symbiotic fungus |
Keywords
- Biological process
Names & Taxonomy
Protein names
- Recommended nameGRAS family protein TF80
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > fabids > Fabales > Fabaceae > Papilionoideae > 50 kb inversion clade > NPAAA clade > Hologalegina > IRL clade > Trifolieae > Medicago
Accessions
- Primary accessionG7J1L1
Proteomes
Genome annotation databases
Subcellular Location
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Chain | PRO_0000450026 | 1-438 | GRAS family protein TF80 | ||
Proteomic databases
Expression
Induction
Accumulates in roots, in a RAM1-dependent manner, during colonization by arbuscular mycorrhizal fungi (e.g. Glomus versiforme).
Interaction
Structure
Family & Domains
Features
Showing features for domain, region, motif.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Domain | 13-436 | GRAS | |||
Region | 20-81 | Leucine repeat I (LRI) | |||
Region | 100-165 | VHIID | |||
Motif | 131-135 | VHIID | |||
Region | 175-207 | Leucine repeat II (LRII) | |||
Region | 216-359 | PFYRE | |||
Motif | 224-228 | LXXLL motif | |||
Region | 362-436 | SAW | |||
Sequence similarities
Belongs to the GRAS family.
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Length438
- Mass (Da)49,706
- Last updated2012-01-25 v1
- Checksum694EB7B6651553A2
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
CM001219 EMBL· GenBank· DDBJ | AES69125.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
PSQE01000003 EMBL· GenBank· DDBJ | RHN65965.1 EMBL· GenBank· DDBJ | Genomic DNA |