F7W101 · F7W101_SORMK

Function

function

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Caution

The sequence shown here is derived from an EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is preliminary data.

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componenteukaryotic 43S preinitiation complex
Cellular Componenteukaryotic 48S preinitiation complex
Cellular Componenteukaryotic translation initiation factor 3 complex
Molecular FunctionRNA binding
Molecular Functiontranslation initiation factor activity
Molecular Functiontranslation initiation factor binding
Biological Processformation of cytoplasmic translation initiation complex

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Eukaryotic translation initiation factor 3 subunit C
  • Short names
    eIF3c
  • Alternative names
    • Eukaryotic translation initiation factor 3 93 kDa subunit homolog
      (eIF3 p93
      )
    • Translation initiation factor eIF3, p93 subunit homolog

Gene names

    • Name
      NIP1
    • ORF names
      SMAC_02110

Organism names

Accessions

  • Primary accession
    F7W101

Proteomes

Organism-specific databases

Subcellular Location

Interaction

Subunit

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex.

Protein-protein interaction databases

Family & Domains

Features

Showing features for region, compositional bias, domain.

TypeIDPosition(s)Description
Region1-101Disordered
Compositional bias33-58Acidic residues
Compositional bias59-74Basic and acidic residues
Domain604-778PCI
Compositional bias803-818Polar residues
Region803-862Disordered

Sequence similarities

Belongs to the eIF-3 subunit C family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    862
  • Mass (Da)
    97,511
  • Last updated
    2011-09-21 v1
  • Checksum
    A28F8DFBFEC82158
MSRFFRGGDDSSTDSSSEEEEVYSSEEEEKVKAEDESSSEEESDEEEESEEEEESDSDEEEGPKKKGANRFLQSDDESEEEEEEEQSEDEATTKVKSAKDKRFDELESTISQIQNGQKINDWSLIASEFDKLNRQVVKLQDGSKAPKSYIKAIADLEDFMNETLAKQKVTPKKMNATNARGLNAVKQRIRKNNKDYQTQIDAYRKDADAFMESDDEIPAPKTVSKALRFAEAPVVSAEQQEEDDKGFSTVDSRGKVVQYTPESILKHLRTIIESRGKKNTDRLEQIKVMETLNKVVPITPYQKIRVLQTLISARFDLGAGGAAQMPLDQWKAAERDLASLLEILEKEKDHVVVEGAEEWDDDDKLPTIPEGEKYLKVPGSVVSLIERLDDELTRSLQAIDPHTSEYIDRLTDEGSLYNTIFRGLLYYEHLRKDASLEVPQESLNRIIQRRLDHVYYKPAQVVKILEENAWKQSGDAGKLINILSNYLFENSEGIIRARAMLCQIYFLALHDEYYKSRDLMLTSHLQETIANFDIATQILYNRTLVQVGLCAFRKGLVYDAQNTLQEICGSGRQKELLAQGVMIQRYSQVTPEQERLEKQRQLPFHMHINLELLECVYLTCSMLLEIPLLAQTGSSPDVKKRIISKTYRRMLEYHERQIFTGPPENTRDHVMQASKALAAGEWKKATDFIHSIKIWDLMPNTEDIKTMLAKQIQEEGLRTYLFTYAPFYDTLAIATLSSMFELDSRKVSAVVSKMISHEELAAALDQVTETVIFRKGVELSRLQSLALTLSDKASSLIETNERTLEQKTQGSANAFSRKDNRGGGQRGGRGGARGGARTGGNPQRQAGGTQFTGGALGNAVRG

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias33-58Acidic residues
Compositional bias59-74Basic and acidic residues
Compositional bias803-818Polar residues

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
CABT02000018
EMBL· GenBank· DDBJ
CCC11453.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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