F6QYI9 · F6QYI9_HUMAN
- ProteinRNA helicase
- GeneDDX39B
- StatusUniProtKB unreviewed (TrEMBL)
- Organism
- Amino acids187 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score2/5
Function
GO annotations
all annotations | all molecular function | virus receptor activity | dna binding | rna binding | cytoskeletal motor activity | catalytic activity | gtpase activity | structural molecule activity | transporter activity | cytoskeletal protein binding | lipid binding | cyclase activity | antioxidant activity | oxidoreductase activity | transferase activity | hydrolase activity | lyase activity | isomerase activity | ligase activity | protein tag activity | cargo receptor activity | histone binding | protein folding chaperone | translation regulator activity | nutrient reservoir activity | receptor ligand activity | molecular transducer activity | molecular adaptor activity | toxin activity | cell adhesion mediator activity | molecular function regulator activity | virus coreceptor activity | catalytic activity, acting on a protein | catalytic activity, acting on dna | catalytic activity, acting on rna | molecular carrier activity | transcription regulator activity | general transcription initiation factor activity | molecular sensor activity | molecular sequestering activity | atp-dependent activity | other molecular function | all biological process | mitotic cell cycle | cytokinesis | cytoplasmic translation | immune system process | muscle system process | circulatory system process | renal system process | respiratory system process | carbohydrate metabolic process | generation of precursor metabolites and energy | dna replication | dna repair | dna recombination | chromatin organization | dna-templated transcription | regulation of dna-templated transcription | trna metabolic process | protein folding | protein glycosylation | amino acid metabolic process | modified amino acid metabolic process | lipid metabolic process | vitamin metabolic process | sulfur compound metabolic process | intracellular protein transport | nucleocytoplasmic transport | autophagy | inflammatory response | mitochondrion organization | cytoskeleton organization | microtubule-based movement | peroxisome organization | lysosome organization | chromosome segregation | cell adhesion | establishment or maintenance of cell polarity | programmed cell death | photosynthesis | mrna metabolic process | snrna metabolic process | vesicle-mediated transport | reproductive process | digestive system process | signaling | cell differentiation | protein catabolic process | extracellular matrix organization | regulatory ncrna-mediated gene silencing | telomere organization | cell junction organization | wound healing | ribosome biogenesis | cilium organization | anatomical structure development | cell motility | nervous system process | endocrine process | protein maturation | transmembrane transport | nucleobase-containing small molecule metabolic process | hepaticobiliary system process | membrane organization | protein-containing complex assembly | cell wall organization or biogenesis | nitrogen cycle metabolic process | protein localization to plasma membrane | defense response to other organism | detoxification | meiotic nuclear division | mitotic nuclear division | mitochondrial gene expression | carbohydrate derivative metabolic process | other biological process | all cellular component | nuclear chromosome | extracellular region | extracellular space | cell wall | nucleus | nuclear envelope | nucleoplasm | chromosome | nucleolus | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | lipid droplet | microtubule organizing center | cytosol | ribosome | cytoskeleton | plasma membrane | cilium | plastid | thylakoid | external encapsulating structure | extracellular matrix | cytoplasmic vesicle | organelle | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | nuclear speck | |
Molecular Function | ATP binding | |
Molecular Function | hydrolase activity | |
Molecular Function | nucleic acid binding | |
Molecular Function | RNA helicase activity |
Keywords
- Molecular function
- Ligand
Enzyme and pathway databases
Names & Taxonomy
Protein names
- Recommended nameRNA helicase
- EC number
Gene names
Organism names
- Organism
- Taxonomic lineageEukaryota > Metazoa > Chordata > Craniata > Vertebrata > Euteleostomi > Mammalia > Eutheria > Euarchontoglires > Primates > Haplorrhini > Catarrhini > Hominidae > Homo
Accessions
- Primary accessionF6QYI9
Proteomes
Organism-specific databases
Subcellular Location
UniProt Annotation
GO Annotation
Disease & Variants
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 181 variants from UniProt as well as other sources including ClinVar and dbSNP.
Genetic variation databases
PTM/Processing
Features
Showing features for modified residue (large scale data).
Type | ID | Position(s) | Source | Description | |||
---|---|---|---|---|---|---|---|
Modified residue (large scale data) | 36 | PRIDE | Phosphotyrosine | ||||
Sequence: Y | |||||||
Modified residue (large scale data) | 43 | PRIDE | Phosphothreonine | ||||
Sequence: T | |||||||
Modified residue (large scale data) | 61 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 62 | PRIDE | Phosphotyrosine | ||||
Sequence: Y | |||||||
Modified residue (large scale data) | 64 | PRIDE | Phosphoserine | ||||
Sequence: S | |||||||
Modified residue (large scale data) | 67 | PRIDE | Phosphoserine | ||||
Sequence: S |
Proteomic databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for domain, motif.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Domain | 68-96 | DEAD-box RNA helicase Q | ||||
Sequence: SGFRDFLLKPELLRAIVDCGFEHPSEVQH | ||||||
Motif | 68-96 | Q motif | ||||
Sequence: SGFRDFLLKPELLRAIVDCGFEHPSEVQH | ||||||
Domain | 99-187 | Helicase ATP-binding | ||||
Sequence: IPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKN |
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusFragment
- Length187
- Mass (Da)20,450
- Last updated2011-07-27 v1
- Checksum40B8FD74E21DCC37
Computationally mapped potential isoform sequences
There are 28 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
Q13838 | DX39B_HUMAN | DDX39B | 428 | ||
F6R6M7 | F6R6M7_HUMAN | DDX39B | 197 | ||
F6WLT2 | F6WLT2_HUMAN | DDX39B | 289 | ||
H0YCC6 | H0YCC6_HUMAN | DDX39B | 141 | ||
F6S4E6 | F6S4E6_HUMAN | DDX39B | 231 | ||
F6S2B7 | F6S2B7_HUMAN | DDX39B | 132 | ||
Q5STU3 | Q5STU3_HUMAN | DDX39B | 425 | ||
H0Y400 | H0Y400_HUMAN | DDX39B | 187 | ||
A0A140T9X3 | A0A140T9X3_HUMAN | DDX39B | 325 | ||
A0A140T9X9 | A0A140T9X9_HUMAN | DDX39B | 179 | ||
A0A140T9L4 | A0A140T9L4_HUMAN | DDX39B | 131 | ||
A0A140T9K1 | A0A140T9K1_HUMAN | DDX39B | 138 | ||
A0A140T9K2 | A0A140T9K2_HUMAN | DDX39B | 64 | ||
A0A140T9N3 | A0A140T9N3_HUMAN | DDX39B | 97 | ||
A0A140T9Q9 | A0A140T9Q9_HUMAN | DDX39B | 32 | ||
A0A140T9A8 | A0A140T9A8_HUMAN | DDX39B | 21 | ||
A0A140T9B4 | A0A140T9B4_HUMAN | DDX39B | 25 | ||
A0A140T973 | A0A140T973_HUMAN | DDX39B | 135 | ||
A0A140T996 | A0A140T996_HUMAN | DDX39B | 189 | ||
A0A0A0MT12 | A0A0A0MT12_HUMAN | DDX39B | 235 | ||
F6SXL5 | F6SXL5_HUMAN | DDX39B | 136 | ||
A0A140TA18 | A0A140TA18_HUMAN | DDX39B | 247 | ||
F6UJC5 | F6UJC5_HUMAN | DDX39B | 245 | ||
F6U6E2 | F6U6E2_HUMAN | DDX39B | 125 | ||
F6TRA5 | F6TRA5_HUMAN | DDX39B | 238 | ||
A0A0G2JJZ9 | A0A0G2JJZ9_HUMAN | DDX39B | 328 | ||
A0A0G2JHN7 | A0A0G2JHN7_HUMAN | DDX39B | 95 | ||
A0A0G2JJL7 | A0A0G2JJL7_HUMAN | DDX39B | 187 |
Features
Showing features for non-terminal residue.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Non-terminal residue | 187 | |||||
Sequence: N |
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AL662801 EMBL· GenBank· DDBJ | - | Genomic DNA | No translation available. |