F6LP62 · F6LP62_PHODC

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Biological Processcell differentiation
Biological Processflower development

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    FRIGIDA-like protein

Organism names

  • Taxonomic identifier
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > Liliopsida > Arecaceae > Coryphoideae > Phoeniceae > Phoenix

Accessions

  • Primary accession
    F6LP62

Structure

Model Confidence:
  • Very high (pLDDT > 90)
  • Confident (90 > pLDDT > 70)
  • Low (70 > pLDDT > 50)
  • Very low (pLDDT < 50)

AlphaFold produces a per-residue confidence score (pLDDT) between 0 and 100. Some regions with low pLDDT may be unstructured in isolation.

Source Identifier Method Resolution Chain Positions Links
AlphaFold AF-F6LP62-F1 Predicted 1-335 AlphaFold · Foldseek

3D structure databases

Family & Domains

Features

Showing features for region, compositional bias.

TypeIDPosition(s)Description
Region1-56Disordered
Compositional bias12-45Basic and acidic residues

Sequence similarities

Belongs to the Frigida family.

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    335
  • Mass (Da)
    37,312
  • Last updated
    2011-07-27 v1
  • Checksum
    AB6EA4A24A9DD70B
MSLPNPSPTSVKEGGEEEEVEKKEEKQVEKKEGEKAAERKQENQVEKGQASAPSPIPSINHFFNLNAALSDFVRQWDGLLHFLDSIGASIDGRSKDLDALQTPDGEQVAAMAVKKEAKSGQEKPSLDEPRAELHSICETMGSRFLRKFVTTHFSELDWLRREVPAALRRAPSPARLVFDSIGRFYLQGSKAYERNPTVIVGRRACILILEFYVLSGLPSEIESSVKQDAMVAALAWRSRLVAEGGVKSATAVDALGLALFVASFGIPNDFGCDVMYHLLRLSNLKKKADVFQQSPIIREKIPEGIFNTPLFLSLRKSGIEEYWEWSRSKAINLHL

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias12-45Basic and acidic residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
JF313261
EMBL· GenBank· DDBJ
AEG74557.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

Disclaimer

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