F4XI60 · F4XI60_9CYAN

Function

GO annotations

all annotationsall molecular functionvirus receptor activitydna bindingrna bindingcytoskeletal motor activitycatalytic activitygtpase activitystructural molecule activitytransporter activitycytoskeletal protein bindinglipid bindingcyclase activityantioxidant activityoxidoreductase activitytransferase activityhydrolase activitylyase activityisomerase activityligase activityprotein tag activitycargo receptor activityhistone bindingprotein folding chaperonetranslation regulator activitynutrient reservoir activityreceptor ligand activitymolecular transducer activitymolecular adaptor activitytoxin activitycell adhesion mediator activitymolecular function regulator activityvirus coreceptor activitycatalytic activity, acting on a proteincatalytic activity, acting on dnacatalytic activity, acting on rnamolecular carrier activitytranscription regulator activitygeneral transcription initiation factor activitymolecular sensor activitymolecular sequestering activityatp-dependent activityother molecular functionall biological processmitotic cell cyclecytokinesiscytoplasmic translationimmune system processmuscle system processcirculatory system processrenal system processrespiratory system processcarbohydrate metabolic processgeneration of precursor metabolites and energydna replicationdna repairdna recombinationchromatin organizationdna-templated transcriptionregulation of dna-templated transcriptiontrna metabolic processprotein foldingprotein glycosylationamino acid metabolic processmodified amino acid metabolic processlipid metabolic processvitamin metabolic processsulfur compound metabolic processintracellular protein transportnucleocytoplasmic transportautophagyinflammatory responsemitochondrion organizationcytoskeleton organizationmicrotubule-based movementperoxisome organizationlysosome organizationchromosome segregationcell adhesionestablishment or maintenance of cell polarityprogrammed cell deathphotosynthesismrna metabolic processsnrna metabolic processvesicle-mediated transportreproductive processdigestive system processsignalingcell differentiationprotein catabolic processextracellular matrix organizationregulatory ncrna-mediated gene silencingtelomere organizationcell junction organizationwound healingribosome biogenesiscilium organizationanatomical structure developmentcell motilitynervous system processendocrine processprotein maturationtransmembrane transportnucleobase-containing small molecule metabolic processhepaticobiliary system processmembrane organizationprotein-containing complex assemblycell wall organization or biogenesisnitrogen cycle metabolic processprotein localization to plasma membranedefense response to other organismdetoxificationmeiotic nuclear divisionmitotic nuclear divisionmitochondrial gene expressioncarbohydrate derivative metabolic processother biological processall cellular componentnuclear chromosomeextracellular regionextracellular spacecell wallnucleusnuclear envelopenucleoplasmchromosomenucleolusmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuslipid dropletmicrotubule organizing centercytosolribosomecytoskeletonplasma membraneciliumplastidthylakoidexternal encapsulating structureextracellular matrixcytoplasmic vesicleorganelleother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentcytosol
Cellular Componentribosome
Molecular FunctionATP binding
Molecular Functionhydrolase activity
Molecular FunctionRNA helicase activity
Molecular FunctionRNA strand annealing activity
Biological Processresponse to cold

Keywords

Enzyme and pathway databases

Names & Taxonomy

Protein names

  • Recommended name
    RNA helicase
  • EC number

Gene names

    • ORF names
      LYNGBM3L_00340

Organism names

  • Taxonomic identifier
  • Organism
  • Strain
    • 3L
  • Taxonomic lineage
    Bacteria > Cyanobacteriota > Cyanophyceae > Oscillatoriophycideae > Oscillatoriales > Oscillatoriaceae > Moorena

Accessions

  • Primary accession
    F4XI60

Proteomes

Subcellular Location

Family & Domains

Features

Showing features for domain, motif, compositional bias, region.

Type
IDPosition(s)Description
Domain3-31DEAD-box RNA helicase Q
Motif3-31Q motif
Domain34-204Helicase ATP-binding
Domain229-376Helicase C-terminal
Compositional bias435-462Basic and acidic residues
Region435-469Disordered

Sequence similarities

Belongs to the DEAD box helicase family.

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Length
    469
  • Mass (Da)
    53,421
  • Last updated
    2011-06-28 v1
  • MD5 Checksum
    991383DF23D172E7296BD4BAF4888E1C
MTVSFQSLGLSESCVSQLEKIGFTTPTTIQAQAIPELLNGHDVLGMSQTGTGKTAAFSLPMLDRIDLDKRTVQALILTPTRELAQQVNQAIRDFSEDRRLHILTVCGGQSIERQIRMLYKGAQIVVGTPGRVIDLLDRGDLKLENLSWVVLDEADEMLSMGFIDDVKKILQQTPEERQTTCFSATMPRPIQELVSKFLKSPVTVKVQQSKAAPARIEQRVYMVPRGCSKIRALHPILELEDPEASIIFVRTRKAAAELTNQLQAAGHSVDEYHGDLSQSQRERLLYRFRKNQVRWVVATDIAARGLDVDHLTHVINFDLPDQVESYIHRIGRTGRAGKTGTAITLIQPFERRKLYQIERKVRQRLEVTRIPTRSQIETRRLERLQAELREALSGERMASFLPVVRELEEEYDAHAIAAAALQLFYDKTQPPISDDLEERMVERPKLRLNTDKRHRTEKPRKPVIQNQSR

Features

Showing features for compositional bias.

TypeIDPosition(s)Description
Compositional bias435-462Basic and acidic residues

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
GL890815
EMBL· GenBank· DDBJ
EGJ35766.1
EMBL· GenBank· DDBJ
Genomic DNA

Similar Proteins

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