F4KIB2 · TMN8_ARATH
- ProteinTransmembrane 9 superfamily member 8
- GeneTMN8
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids648 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Aspect | Term | |
---|---|---|
Cellular Component | endosome | |
Cellular Component | endosome membrane | |
Cellular Component | Golgi apparatus | |
Cellular Component | Golgi medial cisterna | |
Cellular Component | Golgi membrane | |
Cellular Component | plant-type cell wall | |
Cellular Component | plant-type vacuole | |
Cellular Component | trans-Golgi network |
Names & Taxonomy
Protein names
- Recommended nameTransmembrane 9 superfamily member 8
- Alternative names
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionF4KIB2
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Endosome membrane ; Multi-pass membrane protein
Golgi apparatus membrane ; Multi-pass membrane protein
Features
Showing features for topological domain, transmembrane.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Topological domain | 34-285 | Lumenal | |||
Transmembrane | 286-306 | Helical; Name=1 | |||
Topological domain | 307-355 | Cytoplasmic | |||
Transmembrane | 356-376 | Helical; Name=2 | |||
Topological domain | 377-381 | Lumenal | |||
Transmembrane | 382-402 | Helical; Name=3 | |||
Topological domain | 403-422 | Cytoplasmic | |||
Transmembrane | 423-443 | Helical; Name=4 | |||
Topological domain | 444-455 | Lumenal | |||
Transmembrane | 456-476 | Helical; Name=5 | |||
Topological domain | 477-506 | Cytoplasmic | |||
Transmembrane | 507-527 | Helical; Name=6 | |||
Topological domain | 528-538 | Lumenal | |||
Transmembrane | 539-559 | Helical; Name=7 | |||
Topological domain | 560-577 | Cytoplasmic | |||
Transmembrane | 578-598 | Helical; Name=8 | |||
Topological domain | 599-604 | Lumenal | |||
Transmembrane | 605-625 | Helical; Name=9 | |||
Topological domain | 626-648 | Cytoplasmic | |||
Keywords
- Cellular component
PTM/Processing
Features
Showing features for signal, chain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Signal | 1-33 | ||||
Chain | PRO_0000431265 | 34-648 | Transmembrane 9 superfamily member 8 | ||
Proteomic databases
PTM databases
Expression
Gene expression databases
Structure
Family & Domains
Features
Showing features for motif.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Motif | 637-642 | Endoplasmic reticulum export signal | |||
Motif | 646-648 | Golgi retention signal | |||
Domain
The C-terminal KXD/E motif functions as a Golgi retention signal, certainly through the binding to the COP1 coatomer.
Sequence similarities
Belongs to the nonaspanin (TM9SF) (TC 9.A.2) family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
- Length648
- Mass (Da)74,467
- Last updated2011-06-28 v1
- MD5 ChecksumA90AAD9D4D665235A16399898389567B
Sequence caution
Features
Showing features for sequence conflict.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Sequence conflict | 570 | in Ref. 3; BX833631 | |||
Sequence conflict | 592 | in Ref. 3; BX833631 | |||
Sequence conflict | 612 | in Ref. 3; BX833631 | |||
Sequence conflict | 623 | in Ref. 3; BX833631 | |||
Sequence conflict | 634 | in Ref. 3; BX833631 | |||
Keywords
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AL365234 EMBL· GenBank· DDBJ | CAB96839.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
CP002688 EMBL· GenBank· DDBJ | AED91602.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
BX833631 EMBL· GenBank· DDBJ | - | mRNA | No translation available. |