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F4KIB2 · TMN8_ARATH

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentendosome
Cellular Componentendosome membrane
Cellular ComponentGolgi apparatus
Cellular ComponentGolgi medial cisterna
Cellular ComponentGolgi membrane
Cellular Componentplant-type cell wall
Cellular Componentplant-type vacuole
Cellular Componenttrans-Golgi network

Names & Taxonomy

Protein names

  • Recommended name
    Transmembrane 9 superfamily member 8
  • Alternative names
    • Endomembrane protein 1
    • Transmembrane nine protein 8
      (AtTMN8
      )

Gene names

    • Name
      TMN8
    • Synonyms
      EMP1
    • ORF names
      T30N20_110
    • Ordered locus names
      At5g10840

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    F4KIB2
  • Secondary accessions
    • Q9LEV5

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Features

Showing features for topological domain, transmembrane.

Type
IDPosition(s)Description
Topological domain34-285Lumenal
Transmembrane286-306Helical; Name=1
Topological domain307-355Cytoplasmic
Transmembrane356-376Helical; Name=2
Topological domain377-381Lumenal
Transmembrane382-402Helical; Name=3
Topological domain403-422Cytoplasmic
Transmembrane423-443Helical; Name=4
Topological domain444-455Lumenal
Transmembrane456-476Helical; Name=5
Topological domain477-506Cytoplasmic
Transmembrane507-527Helical; Name=6
Topological domain528-538Lumenal
Transmembrane539-559Helical; Name=7
Topological domain560-577Cytoplasmic
Transmembrane578-598Helical; Name=8
Topological domain599-604Lumenal
Transmembrane605-625Helical; Name=9
Topological domain626-648Cytoplasmic

Keywords

PTM/Processing

Features

Showing features for signal, chain.

Type
IDPosition(s)Description
Signal1-33
ChainPRO_000043126534-648Transmembrane 9 superfamily member 8

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for motif.

TypeIDPosition(s)Description
Motif637-642Endoplasmic reticulum export signal
Motif646-648Golgi retention signal

Domain

The C-terminal KXD/E motif functions as a Golgi retention signal, certainly through the binding to the COP1 coatomer.

Sequence similarities

Keywords

Phylogenomic databases

Family and domain databases

Sequence

  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.
  • Length
    648
  • Mass (Da)
    74,467
  • Last updated
    2011-06-28 v1
  • MD5 Checksum
    A90AAD9D4D665235A16399898389567B
MAMEFLRSSRRILESSGCAIALIFLLFIHGAHSFYLPGVAPQDFEKGDELKVKVNKLTSIKTQLPYSYYSLPFCRPSKIVDSTENLGEVLRGDRIENAPYSFKMREAQMCNILGRVTLDAKTAKAFKEKIDDEYRVNMILDNLPLVVPIERVDQGSPSVVYQLGYHVGLKGQYEGSKEQKFFMHNHLAFTVRYHRDIQTDAARIVGFEVKPYSVKHEYEGEWSEKTRLTTCDPHTKRLVVSSATPQEVEQKKEIIFTYDVDFQESEVKWASRWDTYLLMSDNQIHWFSIVNSLMIVLFLSGMVAMIMLRTLYRDISRYNELETQEEAQEETGWKLVHGDVFRLPTNSDLLCVYVGTGVQCLGMVFVTMIFAMLGFLSPSNRGGLMTAMLLLWVFMGLFAGYASSRLYKMFKGTEWKRIAFRTAFLFPAVVSAIFFVLNALIWGQKSSGAVPFGTMFALIFLWFGISVPLVFVGGYIGFKKPAADDPVKTNKIPRQIPEQAWYMNPVFSILIGGILPFGAVFIELFFILTSIWLNQFYYIFGFLFLVFVILIVTCAEITVVLCYFQLCSEDYLWWWRSYLTSGSSALYLFLYATFYFFTKLQITKLVSAMLYFGYMLIASYAFFVLTGTIGFYACLWFTRLIYSSVKID

Sequence caution

The sequence BX833631 differs from that shown. Reason: Frameshift
The sequence CAB96839.1 differs from that shown. Reason: Erroneous gene model prediction

Features

Showing features for sequence conflict.

TypeIDPosition(s)Description
Sequence conflict570in Ref. 3; BX833631
Sequence conflict592in Ref. 3; BX833631
Sequence conflict612in Ref. 3; BX833631
Sequence conflict623in Ref. 3; BX833631
Sequence conflict634in Ref. 3; BX833631

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AL365234
EMBL· GenBank· DDBJ
CAB96839.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
CP002688
EMBL· GenBank· DDBJ
AED91602.1
EMBL· GenBank· DDBJ
Genomic DNA
BX833631
EMBL· GenBank· DDBJ
-mRNA No translation available.

Genome annotation databases

Similar Proteins

Disclaimer

Any medical or genetic information present in this entry is provided for research, educational and informational purposes only. It is not in any way intended to be used as a substitute for professional medical advice, diagnosis, treatment or care. Our staff consists of biologists and biochemists that are not trained to give medical advice.
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