F4KGE8 · GIL1_ARATH
- ProteinProtein GRAVITROPIC IN THE LIGHT 1
- GeneGIL1
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids559 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score3/5
Function
function
Required for red (R) and far red (FR) light-induced and phytochrome-mediated deregulation of negative gravitropism leading to randomization of hypocotyl growth orientation.
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Biological Process | negative gravitropism | |
Biological Process | response to red or far red light |
Names & Taxonomy
Protein names
- Recommended nameProtein GRAVITROPIC IN THE LIGHT 1
Gene names
Organism names
- Strains
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionF4KGE8
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Phenotypes & Variants
Disruption phenotype
Maintenance of negative gravitropic hypocotyls grow after exposure of seedlings to red (R) or far red (FR) light. Reduced seedlings viability.
Variants
We now provide the "Disease & Variants" viewer in its own tab.
The viewer provides 19 variants from UniProt as well as other sources including ClinVar and dbSNP.
PTM/Processing
Features
Showing features for chain.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Chain | PRO_0000440950 | 1-559 | Protein GRAVITROPIC IN THE LIGHT 1 | ||
Proteomic databases
PTM databases
Expression
Gene expression databases
Interaction
Binary interactions
Type | Entry 1 | Entry 2 | Number of experiments | IntAct | |
---|---|---|---|---|---|
BINARY | F4KGE8 | BRX Q17TI5 | 3 | EBI-25519238, EBI-4426649 |
Protein-protein interaction databases
Structure
Sequence & Isoform
- Sequence statusComplete
This entry describes 2 isoforms produced by Alternative splicing.
F4KGE8-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name1
- Length559
- Mass (Da)62,843
- Last updated2011-06-28 v1
- ChecksumB80478FD7D6587C3
F4KGE8-2
- Name2
- Differences from canonical
- 1-75: Missing
Features
Showing features for alternative sequence, sequence conflict.
Type | ID | Position(s) | Description | ||
---|---|---|---|---|---|
Alternative sequence | VSP_059012 | 1-75 | in isoform 2 | ||
Sequence conflict | 229 | in Ref. 4; BAC43150 | |||
Sequence conflict | 297 | in Ref. 4; BAC43150 | |||
Sequence conflict | 348 | in Ref. 4; BAC43150 | |||
Sequence conflict | 394 | in Ref. 4; BAC43150 | |||
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
DQ395085 EMBL· GenBank· DDBJ | ABD59217.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AB016885 EMBL· GenBank· DDBJ | BAB09639.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002688 EMBL· GenBank· DDBJ | AED97121.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002688 EMBL· GenBank· DDBJ | AED97122.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
CP002688 EMBL· GenBank· DDBJ | AED97123.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AK118548 EMBL· GenBank· DDBJ | BAC43150.1 EMBL· GenBank· DDBJ | mRNA | ||
AY075634 EMBL· GenBank· DDBJ | AAL91642.1 EMBL· GenBank· DDBJ | mRNA | ||
BT002623 EMBL· GenBank· DDBJ | AAO11539.1 EMBL· GenBank· DDBJ | mRNA | ||
AK317383 EMBL· GenBank· DDBJ | BAH20054.1 EMBL· GenBank· DDBJ | mRNA |