F4K4T3 · RLP56_ARATH

Function

GO annotations

all annotationsall molecular functionnucleotide bindingmolecular_functionnucleic acid bindingdna bindingchromatin bindingdna-binding transcription factor activityrna bindingcytoskeletal motor activitycatalytic activitynuclease activitysignaling receptor bindingstructural molecule activitytransporter activitybindingprotein bindingtranslation factor activity, rna bindinglipid bindingkinase activitytransferase activityhydrolase activityoxygen bindingenzyme regulator activitycarbohydrate bindingsignaling receptor activitytranslation regulator activitytranscription regulator activityother molecular functionall biological processcarbohydrate metabolic processgeneration of precursor metabolites and energynucleobase-containing compound metabolic processdna metabolic processtranslationlipid metabolic processtransportresponse to stresscell cyclecell communicationsignal transductioncell-cell signalingmulticellular organism developmentcircadian rhythmbiological_processmetabolic processcatabolic processbiosynthetic processresponse to light stimulusresponse to external stimulustropismresponse to biotic stimulusresponse to abiotic stimulusresponse to endogenous stimulusembryo developmentpost-embryonic developmentfruit ripeningabscissionpollinationflower developmentcellular processprogrammed cell deathphotosynthesiscellular component organizationcell growthprotein metabolic processcellular homeostasissecondary metabolic processreproductive processcell differentiationprotein modification processgrowthepigenetic regulation of gene expressionresponse to chemicalanatomical structure developmentregulation of molecular functionother biological processall cellular componentcellular_componentextracellular regioncell wallintracellular anatomical structurenucleusnuclear envelopenucleoplasmnucleoluscytoplasmmitochondrionlysosomeendosomevacuoleperoxisomeendoplasmic reticulumgolgi apparatuscytosolribosomecytoskeletonplasma membranechloroplastplastidthylakoidmembraneexternal encapsulating structureother cellular component
Cell color indicative of number of GO terms
AspectTerm
Cellular Componentplasma membrane

Keywords

Names & Taxonomy

Protein names

  • Recommended name
    Receptor-like protein 56
  • Short names
    AtRLP56

Gene names

    • Name
      RLP56
    • ORF names
      K21P3.17
    • Ordered locus names
      At5g49290

Organism names

  • Taxonomic identifier
  • Strain
    • cv. Columbia
  • Taxonomic lineage
    Eukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis

Accessions

  • Primary accession
    F4K4T3
  • Secondary accessions
    • A0A1P8BAV1
    • Q56WY0
    • Q9FJ11

Proteomes

Organism-specific databases

Genome annotation databases

Subcellular Location

Cell membrane
; Single-pass type I membrane protein

Features

Showing features for topological domain, transmembrane.

TypeIDPosition(s)Description
Topological domain28-899Extracellular
Transmembrane900-920Helical
Topological domain921-947Cytoplasmic

Keywords

PTM/Processing

Features

Showing features for signal, chain, glycosylation.

TypeIDPosition(s)Description
Signal1-27
ChainPRO_000044411628-947Receptor-like protein 56
Glycosylation60N-linked (GlcNAc...) asparagine
Glycosylation75N-linked (GlcNAc...) asparagine
Glycosylation98N-linked (GlcNAc...) asparagine
Glycosylation141N-linked (GlcNAc...) asparagine
Glycosylation148N-linked (GlcNAc...) asparagine
Glycosylation182N-linked (GlcNAc...) asparagine
Glycosylation232N-linked (GlcNAc...) asparagine
Glycosylation330N-linked (GlcNAc...) asparagine
Glycosylation415N-linked (GlcNAc...) asparagine
Glycosylation459N-linked (GlcNAc...) asparagine
Glycosylation478N-linked (GlcNAc...) asparagine
Glycosylation488N-linked (GlcNAc...) asparagine
Glycosylation524N-linked (GlcNAc...) asparagine
Glycosylation606N-linked (GlcNAc...) asparagine
Glycosylation686N-linked (GlcNAc...) asparagine
Glycosylation788N-linked (GlcNAc...) asparagine
Glycosylation828N-linked (GlcNAc...) asparagine
Glycosylation836N-linked (GlcNAc...) asparagine
Glycosylation841N-linked (GlcNAc...) asparagine

Keywords

Proteomic databases

PTM databases

Expression

Gene expression databases

Interaction

Protein-protein interaction databases

Structure

Family & Domains

Features

Showing features for repeat.

TypeIDPosition(s)Description
Repeat105-128LRR 1
Repeat134-157LRR 2
Repeat159-182LRR 3
Repeat183-207LRR 4
Repeat209-232LRR 5
Repeat233-257LRR 6
Repeat259-281LRR 7
Repeat282-305LRR 8
Repeat307-330LRR 9
Repeat332-356LRR 10; degenerate
Repeat357-380LRR 11
Repeat381-404LRR 12
Repeat405-427LRR 13
Repeat428-450LRR 14
Repeat452-476LRR 15
Repeat477-500LRR 16
Repeat502-527LRR 17
Repeat529-549LRR 18
Repeat550-575LRR 19
Repeat577-598LRR 20
Repeat600-616LRR 21
Repeat617-640LRR 22
Repeat642-663LRR 23
Repeat664-686LRR 24
Repeat757-780LRR 25
Repeat781-804LRR 26
Repeat805-829LRR 27
Repeat831-854LRR 28

Sequence similarities

Belongs to the RLP family.

Keywords

Phylogenomic databases

Family and domain databases

Sequence & Isoform

Align isoforms (2)
  • Sequence status
    Complete
  • Sequence processing
    The displayed sequence is further processed into a mature form.

This entry describes 2 isoforms produced by Alternative splicing.

F4K4T3-1

This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.

  • Length
    947
  • Mass (Da)
    106,743
  • Last updated
    2018-05-23 v2
  • Checksum
    4F800B51B19F2EEA
MEGKVFSGQKLILVMLLLGHLHGFSSCIEKERKALLELKKFVMSRCEECEYDSVLPTWTNDTKSDCCQWENIKCNRTSRRLTGLSLYTSYYLEISLLNLSLLHPFEEVRSLDLSNSRLNGLVDDVEGYKSLRRLRNLQILNFSSNEFNNSIFPFLNAATSLTTLSLRRNNMYGPIPLKELKNLTNLELLDLSGNRIDGSMPVREFPYLKKLKALDLSSNGIYSSMEWQGLKNLTNLEVLSLGYNYFDGPIPIEVFCEMKNLQELDLRGINFVGQLPLCFGNLNKLRFLDLSSNQLTGNIPPSFSSLESLEYLSLSDNSFEGFFSLNPLTNLTKLKVFIFSSKDDMVQVKIESTWQPLFQLSVLVLRLCSLEKIPNFLMYQKNLHVVDLSGNRISGIIPTWLLENNPELEVLQLKNNSFTIFQMPTSVHNLQVLDFSENNIGGLFPDNFGRVLPNLVHMNGSNNGFQGNFPSSMGEMYNISFLDLSYNNLSGELPQSFVSSCFSLSILQLSHNKFSGHFLPRQTNFTSLIVLRINNNLFTGKIGVGLLTLVDLCILDMSNNFLEGELPPLLLVFEYLNFLDLSGNLLSGALPSHVSLDNVLFLHNNNFTGPIPDTFLGSIQILDLRNNKLSGNIPQFVDTQDISFLLLRGNSLTGYIPSTLCEFSKMRLLDLSDNKLNGFIPSCFNNLSFGLARKEEITNYYVAVALESFYLGFYKSTFVVENFRLDYSNYFEIDVKFATKQRYDSYIGAFQFSEGTLNSMYGLDLSSNELSGVIPAELGDLFKLRALNLSHNFLSSHIPDSFSKLQDIESLDLSYNMLQGSIPHQLTNLTSLAIFNVSYNNLSGIIPQGKQFNTFDENSYLGNPLLCGPPTDTSCETKKNSEENANGGEEDDKEVAIDMLVFYWSTAGTYVTALIGILVLMCVDCSWRRAWLRLVDAFIASAKSKLA

F4K4T3-2

Computationally mapped potential isoform sequences

There are 5 potential isoforms mapped to this entry

View all
EntryEntry nameGene nameLength
A0A1P8BAW0A0A1P8BAW0_ARATHRLP56690
A0A1P8BAW2A0A1P8BAW2_ARATHRLP56880
A0A1P8BAW9A0A1P8BAW9_ARATHRLP56742
A0A1P8BAV7A0A1P8BAV7_ARATHRLP56933
A0A1P8BAV8A0A1P8BAV8_ARATHRLP56905

Sequence caution

The sequence AED95793.1 differs from that shown. Reason: Erroneous initiation Truncated N-terminus.
The sequence BAB10347.1 differs from that shown. Reason: Erroneous gene model prediction
The sequence BAD94265.1 differs from that shown. Reason: Erroneous initiation Truncated N-terminus.
The sequence BAD94265.1 differs from that shown. Reason: Frameshift

Features

Showing features for alternative sequence.

TypeIDPosition(s)Description
Alternative sequenceVSP_059575229-253in isoform 2

Keywords

Sequence databases

Nucleotide SequenceProtein SequenceMolecule TypeStatus
AB016872
EMBL· GenBank· DDBJ
BAB10347.1
EMBL· GenBank· DDBJ
Genomic DNA Sequence problems.
CP002688
EMBL· GenBank· DDBJ
AED95793.1
EMBL· GenBank· DDBJ
Genomic DNA Different initiation
CP002688
EMBL· GenBank· DDBJ
ANM68731.1
EMBL· GenBank· DDBJ
Genomic DNA
AK221899
EMBL· GenBank· DDBJ
BAD94265.1
EMBL· GenBank· DDBJ
mRNA Sequence problems.

Genome annotation databases

Similar Proteins

Disclaimer

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