F4K4T3 · RLP56_ARATH
- ProteinReceptor-like protein 56
- GeneRLP56
- StatusUniProtKB reviewed (Swiss-Prot)
- Amino acids947 (go to sequence)
- Protein existenceEvidence at transcript level
- Annotation score3/5
Function
GO annotations
all annotations | all molecular function | nucleotide binding | molecular_function | nucleic acid binding | dna binding | chromatin binding | dna-binding transcription factor activity | rna binding | cytoskeletal motor activity | catalytic activity | nuclease activity | signaling receptor binding | structural molecule activity | transporter activity | binding | protein binding | translation factor activity, rna binding | lipid binding | kinase activity | transferase activity | hydrolase activity | oxygen binding | enzyme regulator activity | carbohydrate binding | signaling receptor activity | translation regulator activity | transcription regulator activity | other molecular function | all biological process | carbohydrate metabolic process | generation of precursor metabolites and energy | nucleobase-containing compound metabolic process | dna metabolic process | translation | lipid metabolic process | transport | response to stress | cell cycle | cell communication | signal transduction | cell-cell signaling | multicellular organism development | circadian rhythm | biological_process | metabolic process | catabolic process | biosynthetic process | response to light stimulus | response to external stimulus | tropism | response to biotic stimulus | response to abiotic stimulus | response to endogenous stimulus | embryo development | post-embryonic development | fruit ripening | abscission | pollination | flower development | cellular process | programmed cell death | photosynthesis | cellular component organization | cell growth | protein metabolic process | cellular homeostasis | secondary metabolic process | reproductive process | cell differentiation | protein modification process | growth | epigenetic regulation of gene expression | response to chemical | anatomical structure development | regulation of molecular function | other biological process | all cellular component | cellular_component | extracellular region | cell wall | intracellular anatomical structure | nucleus | nuclear envelope | nucleoplasm | nucleolus | cytoplasm | mitochondrion | lysosome | endosome | vacuole | peroxisome | endoplasmic reticulum | golgi apparatus | cytosol | ribosome | cytoskeleton | plasma membrane | chloroplast | plastid | thylakoid | membrane | external encapsulating structure | other cellular component | |||
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Aspect | Term | |
---|---|---|
Cellular Component | plasma membrane |
Keywords
- Molecular function
Names & Taxonomy
Protein names
- Recommended nameReceptor-like protein 56
- Short namesAtRLP56
Gene names
Organism names
- Strain
- Taxonomic lineageEukaryota > Viridiplantae > Streptophyta > Embryophyta > Tracheophyta > Spermatophyta > Magnoliopsida > eudicotyledons > Gunneridae > Pentapetalae > rosids > malvids > Brassicales > Brassicaceae > Camelineae > Arabidopsis
Accessions
- Primary accessionF4K4T3
- Secondary accessions
Proteomes
Organism-specific databases
Genome annotation databases
Subcellular Location
UniProt Annotation
GO Annotation
Cell membrane ; Single-pass type I membrane protein
Features
Showing features for topological domain, transmembrane.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Topological domain | 28-899 | Extracellular | ||||
Sequence: IEKERKALLELKKFVMSRCEECEYDSVLPTWTNDTKSDCCQWENIKCNRTSRRLTGLSLYTSYYLEISLLNLSLLHPFEEVRSLDLSNSRLNGLVDDVEGYKSLRRLRNLQILNFSSNEFNNSIFPFLNAATSLTTLSLRRNNMYGPIPLKELKNLTNLELLDLSGNRIDGSMPVREFPYLKKLKALDLSSNGIYSSMEWQGLKNLTNLEVLSLGYNYFDGPIPIEVFCEMKNLQELDLRGINFVGQLPLCFGNLNKLRFLDLSSNQLTGNIPPSFSSLESLEYLSLSDNSFEGFFSLNPLTNLTKLKVFIFSSKDDMVQVKIESTWQPLFQLSVLVLRLCSLEKIPNFLMYQKNLHVVDLSGNRISGIIPTWLLENNPELEVLQLKNNSFTIFQMPTSVHNLQVLDFSENNIGGLFPDNFGRVLPNLVHMNGSNNGFQGNFPSSMGEMYNISFLDLSYNNLSGELPQSFVSSCFSLSILQLSHNKFSGHFLPRQTNFTSLIVLRINNNLFTGKIGVGLLTLVDLCILDMSNNFLEGELPPLLLVFEYLNFLDLSGNLLSGALPSHVSLDNVLFLHNNNFTGPIPDTFLGSIQILDLRNNKLSGNIPQFVDTQDISFLLLRGNSLTGYIPSTLCEFSKMRLLDLSDNKLNGFIPSCFNNLSFGLARKEEITNYYVAVALESFYLGFYKSTFVVENFRLDYSNYFEIDVKFATKQRYDSYIGAFQFSEGTLNSMYGLDLSSNELSGVIPAELGDLFKLRALNLSHNFLSSHIPDSFSKLQDIESLDLSYNMLQGSIPHQLTNLTSLAIFNVSYNNLSGIIPQGKQFNTFDENSYLGNPLLCGPPTDTSCETKKNSEENANGGEEDDKEVAIDM | ||||||
Transmembrane | 900-920 | Helical | ||||
Sequence: LVFYWSTAGTYVTALIGILVL | ||||||
Topological domain | 921-947 | Cytoplasmic | ||||
Sequence: MCVDCSWRRAWLRLVDAFIASAKSKLA |
Keywords
- Cellular component
PTM/Processing
Features
Showing features for signal, chain, glycosylation.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Signal | 1-27 | |||||
Sequence: MEGKVFSGQKLILVMLLLGHLHGFSSC | ||||||
Chain | PRO_0000444116 | 28-947 | Receptor-like protein 56 | |||
Sequence: IEKERKALLELKKFVMSRCEECEYDSVLPTWTNDTKSDCCQWENIKCNRTSRRLTGLSLYTSYYLEISLLNLSLLHPFEEVRSLDLSNSRLNGLVDDVEGYKSLRRLRNLQILNFSSNEFNNSIFPFLNAATSLTTLSLRRNNMYGPIPLKELKNLTNLELLDLSGNRIDGSMPVREFPYLKKLKALDLSSNGIYSSMEWQGLKNLTNLEVLSLGYNYFDGPIPIEVFCEMKNLQELDLRGINFVGQLPLCFGNLNKLRFLDLSSNQLTGNIPPSFSSLESLEYLSLSDNSFEGFFSLNPLTNLTKLKVFIFSSKDDMVQVKIESTWQPLFQLSVLVLRLCSLEKIPNFLMYQKNLHVVDLSGNRISGIIPTWLLENNPELEVLQLKNNSFTIFQMPTSVHNLQVLDFSENNIGGLFPDNFGRVLPNLVHMNGSNNGFQGNFPSSMGEMYNISFLDLSYNNLSGELPQSFVSSCFSLSILQLSHNKFSGHFLPRQTNFTSLIVLRINNNLFTGKIGVGLLTLVDLCILDMSNNFLEGELPPLLLVFEYLNFLDLSGNLLSGALPSHVSLDNVLFLHNNNFTGPIPDTFLGSIQILDLRNNKLSGNIPQFVDTQDISFLLLRGNSLTGYIPSTLCEFSKMRLLDLSDNKLNGFIPSCFNNLSFGLARKEEITNYYVAVALESFYLGFYKSTFVVENFRLDYSNYFEIDVKFATKQRYDSYIGAFQFSEGTLNSMYGLDLSSNELSGVIPAELGDLFKLRALNLSHNFLSSHIPDSFSKLQDIESLDLSYNMLQGSIPHQLTNLTSLAIFNVSYNNLSGIIPQGKQFNTFDENSYLGNPLLCGPPTDTSCETKKNSEENANGGEEDDKEVAIDMLVFYWSTAGTYVTALIGILVLMCVDCSWRRAWLRLVDAFIASAKSKLA | ||||||
Glycosylation | 60 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 75 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 98 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 141 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 148 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 182 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 232 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 330 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 415 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 459 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 478 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 488 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 524 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 606 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 686 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 788 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 828 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 836 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N | ||||||
Glycosylation | 841 | N-linked (GlcNAc...) asparagine | ||||
Sequence: N |
Keywords
- PTM
Proteomic databases
PTM databases
Expression
Gene expression databases
Interaction
Protein-protein interaction databases
Structure
Family & Domains
Features
Showing features for repeat.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Repeat | 105-128 | LRR 1 | ||||
Sequence: FEEVRSLDLSNSRLNGLVDDVEGY | ||||||
Repeat | 134-157 | LRR 2 | ||||
Sequence: LRNLQILNFSSNEFNNSIFPFLNA | ||||||
Repeat | 159-182 | LRR 3 | ||||
Sequence: TSLTTLSLRRNNMYGPIPLKELKN | ||||||
Repeat | 183-207 | LRR 4 | ||||
Sequence: LTNLELLDLSGNRIDGSMPVREFPY | ||||||
Repeat | 209-232 | LRR 5 | ||||
Sequence: KKLKALDLSSNGIYSSMEWQGLKN | ||||||
Repeat | 233-257 | LRR 6 | ||||
Sequence: LTNLEVLSLGYNYFDGPIPIEVFCE | ||||||
Repeat | 259-281 | LRR 7 | ||||
Sequence: KNLQELDLRGINFVGQLPLCFGN | ||||||
Repeat | 282-305 | LRR 8 | ||||
Sequence: LNKLRFLDLSSNQLTGNIPPSFSS | ||||||
Repeat | 307-330 | LRR 9 | ||||
Sequence: ESLEYLSLSDNSFEGFFSLNPLTN | ||||||
Repeat | 332-356 | LRR 10; degenerate | ||||
Sequence: TKLKVFIFSSKDDMVQVKIESTWQP | ||||||
Repeat | 357-380 | LRR 11 | ||||
Sequence: LFQLSVLVLRLCSLEKIPNFLMYQ | ||||||
Repeat | 381-404 | LRR 12 | ||||
Sequence: KNLHVVDLSGNRISGIIPTWLLEN | ||||||
Repeat | 405-427 | LRR 13 | ||||
Sequence: NPELEVLQLKNNSFTIFQMPTSV | ||||||
Repeat | 428-450 | LRR 14 | ||||
Sequence: HNLQVLDFSENNIGGLFPDNFGR | ||||||
Repeat | 452-476 | LRR 15 | ||||
Sequence: LPNLVHMNGSNNGFQGNFPSSMGEM | ||||||
Repeat | 477-500 | LRR 16 | ||||
Sequence: YNISFLDLSYNNLSGELPQSFVSS | ||||||
Repeat | 502-527 | LRR 17 | ||||
Sequence: FSLSILQLSHNKFSGHFLPRQTNFTS | ||||||
Repeat | 529-549 | LRR 18 | ||||
Sequence: IVLRINNNLFTGKIGVGLLTL | ||||||
Repeat | 550-575 | LRR 19 | ||||
Sequence: VDLCILDMSNNFLEGELPPLLLVFEY | ||||||
Repeat | 577-598 | LRR 20 | ||||
Sequence: NFLDLSGNLLSGALPSHVSLDN | ||||||
Repeat | 600-616 | LRR 21 | ||||
Sequence: LFLHNNNFTGPIPDTFL | ||||||
Repeat | 617-640 | LRR 22 | ||||
Sequence: GSIQILDLRNNKLSGNIPQFVDTQ | ||||||
Repeat | 642-663 | LRR 23 | ||||
Sequence: ISFLLLRGNSLTGYIPSTLCEF | ||||||
Repeat | 664-686 | LRR 24 | ||||
Sequence: SKMRLLDLSDNKLNGFIPSCFNN | ||||||
Repeat | 757-780 | LRR 25 | ||||
Sequence: LNSMYGLDLSSNELSGVIPAELGD | ||||||
Repeat | 781-804 | LRR 26 | ||||
Sequence: LFKLRALNLSHNFLSSHIPDSFSK | ||||||
Repeat | 805-829 | LRR 27 | ||||
Sequence: LQDIESLDLSYNMLQGSIPHQLTNL | ||||||
Repeat | 831-854 | LRR 28 | ||||
Sequence: SLAIFNVSYNNLSGIIPQGKQFNT |
Sequence similarities
Belongs to the RLP family.
Keywords
- Domain
Phylogenomic databases
Family and domain databases
Sequence & Isoform
- Sequence statusComplete
- Sequence processingThe displayed sequence is further processed into a mature form.
This entry describes 2 isoforms produced by Alternative splicing.
F4K4T3-1
This isoform has been chosen as the canonical sequence. All positional information in this entry refers to it. This is also the sequence that appears in the downloadable versions of the entry.
- Name1
- Length947
- Mass (Da)106,743
- Last updated2018-05-23 v2
- Checksum4F800B51B19F2EEA
F4K4T3-2
- Name2
- Differences from canonical
- 229-253: Missing
Computationally mapped potential isoform sequences
There are 5 potential isoforms mapped to this entry
Entry | Entry name | Gene name | Length | ||
---|---|---|---|---|---|
A0A1P8BAW0 | A0A1P8BAW0_ARATH | RLP56 | 690 | ||
A0A1P8BAW2 | A0A1P8BAW2_ARATH | RLP56 | 880 | ||
A0A1P8BAW9 | A0A1P8BAW9_ARATH | RLP56 | 742 | ||
A0A1P8BAV7 | A0A1P8BAV7_ARATH | RLP56 | 933 | ||
A0A1P8BAV8 | A0A1P8BAV8_ARATH | RLP56 | 905 |
Sequence caution
Features
Showing features for alternative sequence.
Type | ID | Position(s) | Description | |||
---|---|---|---|---|---|---|
Alternative sequence | VSP_059575 | 229-253 | in isoform 2 | |||
Sequence: Missing |
Keywords
- Coding sequence diversity
- Technical term
Sequence databases
Nucleotide Sequence | Protein Sequence | Molecule Type | Status | |
---|---|---|---|---|
AB016872 EMBL· GenBank· DDBJ | BAB10347.1 EMBL· GenBank· DDBJ | Genomic DNA | Sequence problems. | |
CP002688 EMBL· GenBank· DDBJ | AED95793.1 EMBL· GenBank· DDBJ | Genomic DNA | Different initiation | |
CP002688 EMBL· GenBank· DDBJ | ANM68731.1 EMBL· GenBank· DDBJ | Genomic DNA | ||
AK221899 EMBL· GenBank· DDBJ | BAD94265.1 EMBL· GenBank· DDBJ | mRNA | Sequence problems. |