F4JQZ0 · F4JQZ0_ARATH
- ProteinClathrin adaptor complexes medium subunit family protein
- GeneAP4M
- StatusUniProtKB unreviewed (TrEMBL)
- Amino acids380 (go to sequence)
- Protein existenceEvidence at protein level
- Annotation score1/5
Variants
Variant ID(s) | Position(s) | Change | Description | Clinical significance | Provenance | ||
---|---|---|---|---|---|---|---|
ENSVATH06767752 | 34 | F>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 4:g.12676309C>A Codon: TTC/TTA Consequence type: missense Cytogenetic band: Genomic location: 4:g.12676309C>A Locations: - p.Phe34Leu (EnsemblPlants:AT4G24550.1) - c.102C>A (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
tmp_4_12676347_A_G | 47 | E>G | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 4:g.12676347A>G Codon: GAG/GGG Consequence type: missense Cytogenetic band: Genomic location: 4:g.12676347A>G Locations: - p.Glu47Gly (EnsemblPlants:AT4G24550.1) - c.140A>G (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
tmp_4_12676440_G_A | 55 | D>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.07) Somatic: No Accession: 4:g.12676440G>A Codon: GAT/AAT Consequence type: missense Cytogenetic band: Genomic location: 4:g.12676440G>A Locations: - p.Asp55Asn (EnsemblPlants:AT4G24550.1) - c.163G>A (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
ENSVATH06767753 | 68 | Y>C | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0.01) Somatic: No Accession: 4:g.12676480A>G Codon: TAT/TGT Consequence type: missense Cytogenetic band: Genomic location: 4:g.12676480A>G Locations: - p.Tyr68Cys (EnsemblPlants:AT4G24550.1) - c.203A>G (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
ENSVATH00535526 | 92 | V>A | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 4:g.12676552T>C Codon: GTT/GCT Consequence type: missense Cytogenetic band: Genomic location: 4:g.12676552T>C Locations: - p.Val92Ala (EnsemblPlants:AT4G24550.1) - c.275T>C (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
tmp_4_12676828_G_T | 143 | V>L | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.48) Somatic: No Accession: 4:g.12676828G>T Codon: GTG/TTG Consequence type: missense Cytogenetic band: Genomic location: 4:g.12676828G>T Locations: - p.Val143Leu (EnsemblPlants:AT4G24550.1) - c.427G>T (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
tmp_4_12677054_A_C | 196 | S>R | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 4:g.12677054A>C Codon: AGT/CGT Consequence type: missense Cytogenetic band: Genomic location: 4:g.12677054A>C Locations: - p.Ser196Arg (EnsemblPlants:AT4G24550.1) - c.586A>C (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
ENSVATH12200574 | 268 | D>N | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.16) Somatic: No Accession: 4:g.12677771G>A Codon: GAT/AAT Consequence type: missense Cytogenetic band: Genomic location: 4:g.12677771G>A Locations: - p.Asp268Asn (EnsemblPlants:AT4G24550.1) - c.802G>A (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
tmp_4_12677920_C_T | 291 | R>C | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 4:g.12677920C>T Codon: CGT/TGT Consequence type: missense Cytogenetic band: Genomic location: 4:g.12677920C>T Locations: - p.Arg291Cys (EnsemblPlants:AT4G24550.1) - c.871C>T (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
ENSVATH06767769 | 325 | P>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.15) Somatic: No Accession: 4:g.12678117C>T Codon: CCT/TCT Consequence type: missense Cytogenetic band: Genomic location: 4:g.12678117C>T Locations: - p.Pro325Ser (EnsemblPlants:AT4G24550.1) - c.973C>T (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
tmp_4_12678152_G_T | 336 | Q>H | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.07) Somatic: No Accession: 4:g.12678152G>T Codon: CAG/CAT Consequence type: missense Cytogenetic band: Genomic location: 4:g.12678152G>T Locations: - p.Gln336His (EnsemblPlants:AT4G24550.1) - c.1008G>T (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
ENSVATH00535535 | 346 | A>G | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: deleterious (0) Somatic: No Accession: 4:g.12678337C>G Codon: GCT/GGT Consequence type: missense Cytogenetic band: Genomic location: 4:g.12678337C>G Locations: - p.Ala346Gly (EnsemblPlants:AT4G24550.1) - c.1037C>G (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
tmp_4_12678401_G_A | 367 | M>I | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated (0.31) Somatic: No Accession: 4:g.12678401G>A Codon: ATG/ATA Consequence type: missense Cytogenetic band: Genomic location: 4:g.12678401G>A Locations: - p.Met367Ile (EnsemblPlants:AT4G24550.1) - c.1101G>A (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: | |||||||
tmp_4_12678512_T_A | 377 | C>S | 1000Genomes | ||||
Consequence: missense Predictions: - SIFT: tolerated - low confidence (1) Somatic: No Accession: 4:g.12678512T>A Codon: TGT/AGT Consequence type: missense Cytogenetic band: Genomic location: 4:g.12678512T>A Locations: - p.Cys377Ser (EnsemblPlants:AT4G24550.1) - c.1129T>A (EnsemblPlants:AT4G24550.1) Source type: large scale study Cross-references: |